| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1170 |
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| Symbol | |
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| ID | 4028109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1342207 |
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| End bp | 1344174 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637966347 |
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| Product | DNA helicase/exodeoxyribonuclease V, alpha subunit |
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| Protein accession | YP_573225 |
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| Protein GI | 92113297 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit
[TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.768019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCCAG ACCAATACAC GCTGGCACTG GATGCCTCGC CGGGCATGAG CCGGGAGTCG
CTCTTCGAGA GTCTGGCCTG GTGGGAAGCG CTGGGCTGGC TGCGTCCCCT GGATGCGCAT
TTCGCGCGCT TTCTGGCGGA ACACGATGCC CGGGCGCCGG TCGAGGTATT GCTGGCGGCG
GCCCTGGCCA GCCACCAACT GGGGCGCGGA CATGTCTGCC TGACCCTGCC GCGGGCACTC
GCTGCTCCGC GCGACGTGCT GTCGTTGCCG CCTCTGGAAG AGGACGCTCC GCACGAGTCG
GTCCCGTTGC CGGACGACTT CCTGCGCGGT CTGGAGAGCG CGACCTGGGC CGCGCGGCTG
GCCGAGTCGC CGCTGGTGGC GTCGCCCGGG CCGGGCACCA CGCCCTTGGT GCTGGTCGGC
GAACGTCTGT ACCTGCGGCG CTACTGGCGC GCCGAGCAGG CCGTGGCCAC GCACCTCGGC
GCGCGTCTGG GGCGCCCGTT GCCGGTGGAG GCCTCGCTGG CCGCACCATT GGCGCGGCTG
TTCTCGGCCA ATGGCGCCTC GGAGGACGCG CCGGACTGGC AGAAGGTGGC CTGTACGCTG
GCGTTGCGCA ACCGGTTGAC GATCATCTCC GGTGGTCCCG GAACCGGCAA GACGACGACG
GTGACGCGCT TGCTGGCATT GCTCCAGACG CAGGCGCTGG CGGCCTCCCG AGGCGAGCGT
GCGCTGCGCA TTCAACTGGC GGCGCCCACC GGCAAGGCGG CGGCGCGCTT GTCCGAGTCC
ATCGCCGGCG CCATGAGCGG TCTGGATGTC GAAGCCGACG TGGCGGCGAC GCTACCGCGC
GAGGCGCTGA CGCTGCATCG GCTGCTGGGC GCTCGTCCCG ATACGCGACA GTTTCGCCAT
CACGCGGGGC AACCGCTGAG CCTCGACCTG CTGGTGGTGG ACGAGGCCTC GATGGTTGAC
CTGGAACTGA TGGCGGCGCT GCTCGAGGCC CTGCCCGACG AGGCGCGCCT GATCCTGCTC
GGCGACAAGG ACCAGCTTGC CTCGGTGGAG GCCGGCTCGG TGCTGGGCGA TCTCTGCGCC
AATGCGCTGG ACCAGGGCTA TTCGCCGGCC GCCTGCGAAG TGCTGTCGCA ACTGGCGGAT
ACCGACATGA CGCCCGACCC GGCATGTTCG CCGCTGGCAG ACCACGTCGT CATGCTGCGC
AAGAGTTTCC GCTTCGACGC GCACAGCGGT ATCGGTGCCC TGGCCGCGGC CACCAACGAC
GGCGATGTCG CGGCCTTCCG CCAGGCCTGG CAAGCGCAGT ACACGGACAT CCAGTGGCTG
GCATCCTCGA ACGCCCAGCG CGAGGTCGAG CGTGCCGCCT TGGCGGGGTA TCGCGATTTT
TATCGCCGCG TGCGCGACGG GGCGTCCCCG GCCGACGTGC TGGCGCGGTT GAACGACTTT
CAGGTGCTGT GCGCCCTCAA GCGCGGGCCC TGGGGTGTCG AGGGGCTCAA TGCCCGTATC
GCCGCCGGCC TGTGGCGTGA AGGCTGGATC GAGGACCCGC AAGGCTGGTA TGCCGGGCGC
CCGGTGATGG TGACGCGCAA CGACCCGCAG CTGGGGCTCT ACAATGGCGA TATCGGCATC
GCCCTGCCGG ATGCCGAGGC GGGGCGGCGC CTGCGTGTGT TCTTCGCGAC TGCCGGTGGC
GTCCGGGCCG TGCTGCCATC GCGGCTCGAC GCCTGCGAGA CGGTATTCGC GATGACGGTG
CACAAGTCGC AAGGCTCCGA GTTCACGCAC GTGATGTTCG TGCTGCCCGA ACGCGCCAAT
CCGATCCTGA CCCGCGAGCT GGTGTATACC GGCATCACTC GGGCCAGGCA GCGCTTGACG
CTGGCCGGGG GCGGCGCGAG CGTCGTCGAG AGTGCTCTGA CGCGACGCGT GGTGCGCGAC
AGCGGGTTCG CCGAGTGGGT GGCGGCCCTG GACTGGCCGA GGGATTGA
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| Protein sequence | MSPDQYTLAL DASPGMSRES LFESLAWWEA LGWLRPLDAH FARFLAEHDA RAPVEVLLAA
ALASHQLGRG HVCLTLPRAL AAPRDVLSLP PLEEDAPHES VPLPDDFLRG LESATWAARL
AESPLVASPG PGTTPLVLVG ERLYLRRYWR AEQAVATHLG ARLGRPLPVE ASLAAPLARL
FSANGASEDA PDWQKVACTL ALRNRLTIIS GGPGTGKTTT VTRLLALLQT QALAASRGER
ALRIQLAAPT GKAAARLSES IAGAMSGLDV EADVAATLPR EALTLHRLLG ARPDTRQFRH
HAGQPLSLDL LVVDEASMVD LELMAALLEA LPDEARLILL GDKDQLASVE AGSVLGDLCA
NALDQGYSPA ACEVLSQLAD TDMTPDPACS PLADHVVMLR KSFRFDAHSG IGALAAATND
GDVAAFRQAW QAQYTDIQWL ASSNAQREVE RAALAGYRDF YRRVRDGASP ADVLARLNDF
QVLCALKRGP WGVEGLNARI AAGLWREGWI EDPQGWYAGR PVMVTRNDPQ LGLYNGDIGI
ALPDAEAGRR LRVFFATAGG VRAVLPSRLD ACETVFAMTV HKSQGSEFTH VMFVLPERAN
PILTRELVYT GITRARQRLT LAGGGASVVE SALTRRVVRD SGFAEWVAAL DWPRD
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