Gene Csal_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1076 
Symbol 
ID4028091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp1215702 
End bp1216370 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content57% 
IMG OID637966254 
ProductGntR family transcriptional regulator 
Protein accessionYP_573132 
Protein GI92113204 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.928588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAG GGGTGCAGGA GCGGTCGTCG AGTGATCGTG CCTATAGCGA TATACGCGAC 
AAGATCATCA CCACCGTACT GAAACCCGGT GAAAGGATTC ATGAAAAAGC GCTTTCGGAA 
GAGTTCGGCA TCAGCCGCAC GCCGATTCGC GAAGCCCTGA TGCGACTGCG CTACGACGGC 
TTCGTCGATA TCTTCGCTCA GCGCGGCACC TTCGTGACGC CCATCCGCCT CGATGTCATC 
AAGGCGGCTC ACTACACGCG CTCGGTGCTG GAATGCGCCC TGATACGCGA TGCCGCCATG 
CAATGCAGCG ACCGCGATGC TCGAGATCTG TACGACAACC TCGAGCATCA GCGGCTCGTG 
TATCGGCAAG GGCAGTACTA CAAGATCGAA ACCCTCGACG AAGAGCTTCA TCAGAAGATT 
GCCGACATCG CGGGGCAACC CTCAGTCTGG CAAATCATTT ACCACGTTCA GCTGCATATC 
AACCGAGTGC GGATGCTGTT TCTCAACGAA GAGCGCGTGC CCGCCATCGT CGAGGAACAC 
ACGCGGATCA TCGACGCCAT CGCCAACCGC GATCCCGACG CTGCGGAAAG CGCCATGAAA 
GCGCATTTGC AGTACATGGA CGAGAACATC CAGAAACTCG CCGAAAGCTA CTCGGAATAT 
CTGTCTTGA
 
Protein sequence
MMKGVQERSS SDRAYSDIRD KIITTVLKPG ERIHEKALSE EFGISRTPIR EALMRLRYDG 
FVDIFAQRGT FVTPIRLDVI KAAHYTRSVL ECALIRDAAM QCSDRDARDL YDNLEHQRLV 
YRQGQYYKIE TLDEELHQKI ADIAGQPSVW QIIYHVQLHI NRVRMLFLNE ERVPAIVEEH 
TRIIDAIANR DPDAAESAMK AHLQYMDENI QKLAESYSEY LS