| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1074 |
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| Symbol | |
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| ID | 4028089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1213144 |
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| End bp | 1214424 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637966252 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_573130 |
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| Protein GI | 92113202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTCG TCGTCTTCCT CGCCGTGCTG TTCTCGTTGA TGTTGATCGG CATGCCGATC
GCCTTCGCCA TGCTCAGCTC CGCCGTGGTG ATGATGTGGA CCCAGGACAT GTTCAATGTC
ACCACACTGG CCGAGCACTT CATCACCGGG GCCAACAGCT TTGCCTTGAT GGCCATTCCC
TTTTTCATCC TGACCGGCGA GATCATGAAT GCCGGGGGCG TTTCCAAGCG CATCGTCGAC
TTTGCCTCGT CACTGGTGGG CCATGTGAAA GGCGGCCTGG GCTATGTCGC CATCGTGGCC
GGGGTGATCT TTGCCGGGTT ATCCGGCTCC GCCGTTGCCG ATACCGCGGC ACTGGGCTCG
ATCCTCATCC CCATGATGGT GGCGCAAGGC TACGAGAAGA AGCGCTCGAC CGCGCTGGTG
GCATCCGTCG GCATCGTGGG CACCGTGATT CCCCCGAGCA TTCCCTTGAT TCTTTACGGG
GTCGTGGGCG GCGTCTCGAT TACCGGGTTG TTCATGGGCG GCATCGTGCC CGGGGTCATC
ATGGCGATCG GCATGACGTT CACCTGGTGG CTGGTCGCGC GCAAAGCCGA TACCAAGCGG
CTCGAGCGTG CCAACTGGCA GGCGCGGCTT CACAGCTTCA AGCGTGCCTT CTGGGCCTTG
CTGCTGCCGC TGATCATCAT CGTCGGGCTG CGTGGCGGCG TGTTCACGCC GACAGAAGCG
GGCGTCGTCG CTGCGGTATA CGCGCTGTTG ATCAGCCTCT GCTATCGAGA AATTCGTCTG
ACGCAGCTGT TCGATGTGCT CACCAACACC GCCAAGACCA CGGCCATCGT GATGCTGATC
GCCTCGGCGG CCATTGTCAC GGCGTATGCG ATCACGGTAG CGCAGGTTCC CGCCCAGATC
GCGGCAGGGC TCACGAGCAT TACCGACAGC CCGACCCTGA TGCTCTTGAT CATCATGGTC
ATACTGCTGC TGTTCGGCTG CGTGATGGAC ATGACACCCG CGGTGCTGAT TTTCGCGCCC
GTGCTGATCC CGGTGGTCGA GCAGCTCGGT ATCGATCCCA TCTACTTCGG TGTGGTGATG
ATCATCAACC TCTCCATCGG CTTGATCACA CCGCCGGTGG GCACGGTGCT CTATGTAGGG
TGCAGCATCA GCCGAATCAG CATCATCGAC ATTTCGCGCG GCATATGGCC GATGCTGTTG
ATGTACGTGG CGATCCTGTT TGCACTGATT CTCTTCCCCG AGATCGTGAC CTATCCCTTA
AGTATTCTGC ACAACGGTTG A
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| Protein sequence | MMVVVFLAVL FSLMLIGMPI AFAMLSSAVV MMWTQDMFNV TTLAEHFITG ANSFALMAIP
FFILTGEIMN AGGVSKRIVD FASSLVGHVK GGLGYVAIVA GVIFAGLSGS AVADTAALGS
ILIPMMVAQG YEKKRSTALV ASVGIVGTVI PPSIPLILYG VVGGVSITGL FMGGIVPGVI
MAIGMTFTWW LVARKADTKR LERANWQARL HSFKRAFWAL LLPLIIIVGL RGGVFTPTEA
GVVAAVYALL ISLCYREIRL TQLFDVLTNT AKTTAIVMLI ASAAIVTAYA ITVAQVPAQI
AAGLTSITDS PTLMLLIIMV ILLLFGCVMD MTPAVLIFAP VLIPVVEQLG IDPIYFGVVM
IINLSIGLIT PPVGTVLYVG CSISRISIID ISRGIWPMLL MYVAILFALI LFPEIVTYPL
SILHNG
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