Gene Csal_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1073 
Symbol 
ID4028088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1212629 
End bp1213147 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content58% 
IMG OID637966251 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_573129 
Protein GI92113201 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATGA CGACCTTGTT CGGTTTCTTG AAAACATCCA TCAGGCTGGC CATTGCCGTG 
GCCCTGGTGC TGATGGTGGG GTTCGTCTTT ACCAATGTCG TGCTCCGCTA TGCCTTCGAC
AGCGGACTGA CATGGTCCAG TGAGGTGGCG CGATACCTCT TCGTATGGGT CGTGTTCCTG
GGCTCCATCC TCGCGGTGAT GGAACATAGC CACCTGGGCG TGGACATCCT GGTACGCCAC
ATTCCCGGCT GGCTTCAGAA GCTGCTGTTC CTGCTGACGA CGGCCCTGAC CGTGGCGGTG
ATGACTCTCG TGGTCAAAGG GCTTCTGGTC CTGATCGAAC TGAACGTGGG GATTACCGGA
CCCGCCACCG ATATTCCCAT CAACAATTAC TACTATGCCG GCATGATCGC GGCCATTCTG
ATGTCCGCGG TGATGGCGTA CCAGGCGTTG AGCTTCGTCC TGACCGGCCG TAATGGCCCC
ACATGGGCCT ACGATCGTGA CCAGGAGTCG GTGTCATGA
 
Protein sequence
MSMTTLFGFL KTSIRLAIAV ALVLMVGFVF TNVVLRYAFD SGLTWSSEVA RYLFVWVVFL 
GSILAVMEHS HLGVDILVRH IPGWLQKLLF LLTTALTVAV MTLVVKGLLV LIELNVGITG
PATDIPINNY YYAGMIAAIL MSAVMAYQAL SFVLTGRNGP TWAYDRDQES VS