Gene Csal_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1062 
Symbol 
ID4028077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1200562 
End bp1202649 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content60% 
IMG OID637966240 
ProductHpt sensor hybrid histidine kinase 
Protein accessionYP_573118 
Protein GI92113190 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGG AGCAGGTGGA AAGCCGGCCG ACACACGGCG TATCAGGTAC TCGTGGCGAG 
CTTTCTTCCT GGACCCGGCT GATGGAGCGT TTTGACATTC TCTACGGCAG GATAAAGCTG
CTGCAGCAAG GACAATATCG CCAATATCTG GCATCACAGC CTGAGCTCCT TGAAGCATTG
TGGCACCTCG ATGCTCGTCT TGAAGATATC GATGTACTGC TGCAGCCACT CTATCAGGAA
GCGCTGGCAC CGCTGCCTGC TCAGCGTCGG CAACTGTCAC AATTGATCAG CGCCATGCGC
GACGATGCGG AACGGCTGCT GCTCGACCAT AACGAGGCGC TGGCTAGCGT TCGTGAACAG
ACCCGGCAGG GCATGCTGCG GGTTTACGTG CTGCTGTTCG TGCTGATGAT ATTGATCATG
CTGGCAGGAA CCTATCTTGT CATGGCGTTG TGGCGCGAGG CGCGCTCACG TGCCCGCCAC
GGTGAGCGTT TGCAGCGGCA GTCTCAGGAA CTTCAGCGTG CTGTGCAGCA GGCAGAAGCG
GCGAGTCAGT CCAAGTCGGA ATTCATGGCA ATCATGAGTC ACGAGGTCCG CACCCCGCTC
AATGGTGTGG TGGGTATGCT CGATGTGCTC GAGGATGAGC CTTGTCAGGA AAAGCGTGAG
CAGCACTTCG CGACCCTGAG GGAAAGCACC GCCTCGCTGC GCGCGGTTAT CAATGATGTA
CTGGACTACT CGAAGATCGA AGCAGGACGT CTTGATCTTG AGCATTCGCC GTTTCCCTTG
ACGCGCATGG TCTCGCGGCT TGCCGAAGGA TATCAATCAC GTCAGACCAG TGACGTGTCG
CTCATCGTGC AGTTAGGTGA TGACTTGCCT CCGGTGGTGA TCGGTGATGC GACTCGCCTG
CGACAAGTGT TGATGAACCT GATGGACAAT GCCTTCAAGT TTACCCAGGT GGGCAGTATT
ACGCTCTCTG TTCAATCGCG AAAGCCGGCG ACGATCTTTT TCGAGGTGCG TGATACCGGT
GTCGGCATCG ACAAGCAGGT CCAGGCCGCG CTTTTCGAAC CCTTCACTCA GGTGGATACC
TCTCTGTCAC GGCGCCATGA GGGGACCGGC CTTGGCCTGG CGATTTGCTA TCGGCTGGTA
GAAGCCATGG GGGGGCACCT TGAATTGAAC AGTATGCCGG ACCTGGGCAG CGTCTTTCAC
TTCTGTCTTC CACTGAGTGC CGCCGAGGGT GTCAGCGAGC GTTTGCTCGA CGATCCGTCT
GAAGCACTGG CGTCACGACA TCTGCTGGTG GTGGAAGACA ACCCTATCAA TCGGGATCTG
GTGGCCGCCT TGCTCAAGCG CCTCGGTCAG ACCTTCGATC TTGCCGAAGA CGGAGAGCAG
GGGCTGGCGG CGATGAAGTG CAAGGACTAT GACCTGGTGC TGATGGATAT GCAGATGCCT
TGCATGGATG GCGTGGAGAC GACTCGGCGC TTTCGTGCCG AGGAGGGGGA GGGTCACCTG
CCTATCGTGG CCATGACGGC CAACGTCATG CCGGAGCATC GGCAGGCATG CCGTGAGGCG
GGAATGGACG ACATTCTGAG CAAGCCTTTC ACTCGACACG AGTTGGCGAA TGTTCTTCGT
GCCTATCCAC TCAGGCGTCA TCAGGCTGCA TCACATGTCG TGCAGCTTGA CCACGCGCCC
GAGCAGGTGG CCGATGCTGA CGCCGCCAGG CCCGCGGAGG ATCGCAGCTG CGTCGGCGTG
GGGGGCGGCC TGGATGCTGA CACCGTGACC GAACTCGAGC AGAGCCTGGA GCATGAGACG
TTGAAGACGC TGCTCGCAGC GTTTTTCTCA CGTCTCGATG GTCGGGTCGA AGTGTTGCGC
GAGGCTGTCG ATGGCAGTGA CCGTGAGCGG ATCAAGCGCG AGGCGCACTC GCTCAAGGGC
GCGGCGGCCT CGATGGGGTG TCGGCAGCTT GCCGCAGAAG CGGCGCGCCT AGAGCAGTTG
GCGCCGAATG CCGAAATGTC GCACTGTCGC GCGCAAATTG CCCGTATCGG ACGAGGGGGG
AGTGACGCGG TTTGCCTATG GCGTGGCAGG GGGGTCGATC TGTCTTGA
 
Protein sequence
MALEQVESRP THGVSGTRGE LSSWTRLMER FDILYGRIKL LQQGQYRQYL ASQPELLEAL 
WHLDARLEDI DVLLQPLYQE ALAPLPAQRR QLSQLISAMR DDAERLLLDH NEALASVREQ
TRQGMLRVYV LLFVLMILIM LAGTYLVMAL WREARSRARH GERLQRQSQE LQRAVQQAEA
ASQSKSEFMA IMSHEVRTPL NGVVGMLDVL EDEPCQEKRE QHFATLREST ASLRAVINDV
LDYSKIEAGR LDLEHSPFPL TRMVSRLAEG YQSRQTSDVS LIVQLGDDLP PVVIGDATRL
RQVLMNLMDN AFKFTQVGSI TLSVQSRKPA TIFFEVRDTG VGIDKQVQAA LFEPFTQVDT
SLSRRHEGTG LGLAICYRLV EAMGGHLELN SMPDLGSVFH FCLPLSAAEG VSERLLDDPS
EALASRHLLV VEDNPINRDL VAALLKRLGQ TFDLAEDGEQ GLAAMKCKDY DLVLMDMQMP
CMDGVETTRR FRAEEGEGHL PIVAMTANVM PEHRQACREA GMDDILSKPF TRHELANVLR
AYPLRRHQAA SHVVQLDHAP EQVADADAAR PAEDRSCVGV GGGLDADTVT ELEQSLEHET
LKTLLAAFFS RLDGRVEVLR EAVDGSDRER IKREAHSLKG AAASMGCRQL AAEAARLEQL
APNAEMSHCR AQIARIGRGG SDAVCLWRGR GVDLS