| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1024 |
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| Symbol | |
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| ID | 4027870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 1155254 |
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| End bp | 1156555 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637966201 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_573080 |
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| Protein GI | 92113152 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0364171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACGC TCAGCCTCGT CACGATATTG ACGCTCGCGC TACTGCTCGG CGGTGGCGTA
TGGATCGCCT TCGCCCTGCT CGGCACCGGC TGGGTCGCGC TGACGTTCTT CGGCAGCTTC
GCCCCGGGGC CGATTCTCGC GTCCGATTTC TGGGGCGCCA GTTACGGGTG GGACCTGACC
GCGCTGCCGA TGTTCGTATG GATGGGAGAA ATCCTTTTCC GCTCGGGTCT GGCCGACAAC
ATGTTTCGCG CCCTGTCGCC CTGGCTCAAC CGCCTGCCCG GACGCCTGCT GCATTCCAAC
ATCATCGGTA GCGGCCTGTT CGCCGCGGTG TGCGGTTCCT CGGCGGCGAC CTGTGCCACG
GTCGGCAAGA TGACCCTGCC CGAACTGGAG CGGCGAGGGT ACGACGGCAA CATGGCCATC
GGCACGCTGG CCAGCGCATC GACCCTGGGA CTCTTGATTC CGCCCTCGAT CATGATGATC
GTCTACGGCG TGGTGACCGA ACAATCGATC TCGCGTCTGT TCATCGCCGG CGTGTTGCCG
GGCCTGTTGC TGCTCGGGCT GTTCATGGCC TACCTGGTCG GCTGGTCGTT GCTGGTCGGC
AACCGCCAGG GGCGTGCCGG TGAAGGCGCG GCCCACATGC CGTTCGGGCA GAAGCTCCGC
AATAGCGCGC AGCTGATTCC GCTGCTGCTG CTCATCGGCG GCATTCTGGG CAGCATCTAC
GGCGGGCTGG CCTCGCCCAC CGAAGCCGCC GCCGTGGGCG TGGTGCTGTC GATGGCGATC
GCGCGGGGCA ACGGCCATTT CGACAAGGCC ATCTTCCTCG ATTCGCTCTT CGCGGCGCTG
CGCACCGCCT GCATGATCGC CTTCATCATC GCCGGTGCCT CGTTTCTCTC CTCGGCGATG
AGCTTCACGC AACTGCCCAT GCAGCTCGCC AACGCCATCG CCGAGATGGG GCTGTCTCCG
ACCATGCTGC TGGTCGTGCT GACACTCTTC CTGCTGGTAC TGGGGTGTTT TCTCGACGGC
ATCTCGCTGA TCCTGCTGGT CACCTCGATC ATCATGCCGC TGATCGATGC CGCCGGTATC
GACCTGATCT GGTTCGGCAT CTACCTGGTC ATCGTGGTGG AAATGTCGCA GATCACGCCG
CCGGTCGGTT TCAATCTGTT CGTCATTCAG GGGCTGACCG GCAAGGACAT CGTCACCATC
ACCCGTGCGA CCTTGCCGTT CTTCCTGCTG ATGATCCTCG CCGTCGTGCT GCTGCACCTC
TTCCCGGGCA TCGCGCTGTA TCTGCCCCAG GCGATGAACT GA
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| Protein sequence | MLTLSLVTIL TLALLLGGGV WIAFALLGTG WVALTFFGSF APGPILASDF WGASYGWDLT
ALPMFVWMGE ILFRSGLADN MFRALSPWLN RLPGRLLHSN IIGSGLFAAV CGSSAATCAT
VGKMTLPELE RRGYDGNMAI GTLASASTLG LLIPPSIMMI VYGVVTEQSI SRLFIAGVLP
GLLLLGLFMA YLVGWSLLVG NRQGRAGEGA AHMPFGQKLR NSAQLIPLLL LIGGILGSIY
GGLASPTEAA AVGVVLSMAI ARGNGHFDKA IFLDSLFAAL RTACMIAFII AGASFLSSAM
SFTQLPMQLA NAIAEMGLSP TMLLVVLTLF LLVLGCFLDG ISLILLVTSI IMPLIDAAGI
DLIWFGIYLV IVVEMSQITP PVGFNLFVIQ GLTGKDIVTI TRATLPFFLL MILAVVLLHL
FPGIALYLPQ AMN
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