Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_1022 |
Symbol | |
ID | 4027868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 1153329 |
End bp | 1154114 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637966199 |
Product | short chain dehydrogenase |
Protein accession | YP_573078 |
Protein GI | 92113150 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.917277 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGAAA GGGCACCGCG TCTGCGCGGC AAGCATGTCT TCATCACCGG GGCCGCGGCC GGCATCGGCC GGGCCATGGC CGAGGCCTGC GTTCAGGAAG GTGCGCGCGT CTCGCTGGCG GATATCGATC TCGAGGGCGT GCAAGCCGTC GCCCGGCAAC TGCGCGATAC CGGCGGGGTG GCAGTGGCGA TGAGCTGCGA TATCGCCGAG CCCGCGTCGG TGGACGCGGC GCTCGAGGCG GCTCGGGGAG CCCATGGGCC GATCACGACC CTGATCAACA ACGCCGGGCG CAACGTCTTC CACACGCCGC TTGAAATGCC CGAGGCTGCC TGGCAGCGCT GCATGTCGGT GGACCTGGAG GGCGCCTGGC ATTGCGCGCG CGGTGTGTTG CCGGACATGC TCGCGCAGGC GAGCGGCAGC ATCATCAACG TGGCCTCGAC CCATGCGTTT TCCATCCTGC CGGGTTGCTT TCCCTATGCG GTGGCCAAGC ACGGTCTGAT GGGGCTGACG CGATCGCTGG GGATCGAATA TGCTCGACAA GGCGTTCGCG TCAATGCCAT CGCGCCGGGC TATATCGCCA CGCCCGCGGT CGAGGCACAC TGGCAACGAT TCGACGATCC GGACGCGGCC AGGCAGCGGA TCGAGGCGCT GTTGCCGCCG GGGCGCCTGG GAGCGCCGCG AGAGGTCGCC ATGACCGCGG TCTTTCTCGC CTCCGACGAG GCACCGTTCA TCAACGCAAG CTGTATCACC ATCGATGGCG GGCGCAGCGT GGTCTATCAC GATTGA
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Protein sequence | MPERAPRLRG KHVFITGAAA GIGRAMAEAC VQEGARVSLA DIDLEGVQAV ARQLRDTGGV AVAMSCDIAE PASVDAALEA ARGAHGPITT LINNAGRNVF HTPLEMPEAA WQRCMSVDLE GAWHCARGVL PDMLAQASGS IINVASTHAF SILPGCFPYA VAKHGLMGLT RSLGIEYARQ GVRVNAIAPG YIATPAVEAH WQRFDDPDAA RQRIEALLPP GRLGAPREVA MTAVFLASDE APFINASCIT IDGGRSVVYH D
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