| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0950 |
|---|
| Symbol | |
|---|
| ID | 4026727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 1067643 |
|---|
| End bp | 1070006 |
|---|
| Gene Length | 2364 bp |
|---|
| Protein Length | 787 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637966127 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_573006 |
|---|
| Protein GI | 92113078 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0668] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGGC TTTTTTATGT CATGACACCG GTTGGTTACG GCGCGCGGCT AGGGCACTCT
GTGGACATTC ATGAAATACG CGAGGTGAGC ATGCTAGGCG GTGCGACACG TTGGGGCCGA
GGGCTCGTTC TGCTCTGTGC GCTCCTGTTC TCGGGGTGGG CATGGGGGCA GGCCGCTTCC
CCCTTGTCGT CTCTCGCCGG CGGTGGAGGG CAGCAGGAAG ACGCTGCGCC GTCGCCCGAG
CAGGCGCGTG AATCGCTGGA TGGCGTGATC TCGATGCTCG AGGATCAGCA GCGCCGCGAG
GCCCTGCTGT CGCAACTGCG TGAGCTGCGC GCCTCGCTGG AGGGCGTGTC GAACGAGAGC
GATCCGCGAA CGCCTAGCGG GCTGCTGGGT GCCATCGCCG ACTCGCTGAC CTCGCTGGGC
GAGTCGGGGG AGGCGGTCAC GCCGCTCGAA TATTGGCAAT CAATGGGCGA GCGGGCGGGC
AATACCCTGA TGCAGCGTGT CGCATCGCTG GAGTCGGCAC TGCATCTGAT CGGCGATTTC
GCATGGGTGT TGAGCCTGTG GGGCGGCAGC GCGGCGTTGC TGGTATTGCT GGGACGAGCC
CTGGCCAAGC GCATGAACAT GCAGTTGGCG CTGTCGGCCG AGCCGAGTAC CTGGATGCTG
ATTCGCCACA TGATACGCCG CTTGCTGCCC TGGGGGCTGG CCTTTGCCTT GACGCTGGGC
GTGGTGCACG GCATGGCCTC CACACTGGGC ATGACCCTGG CGATGGTGAT CGCGTACCTC
ACGCTCTGCG GTATCCTGTT CACGGCGGTC TGCGAGGTCG TGTTCTCGCT TTTCGCCAGC
GGGCACCGTC GGGTGGCGCT GCGTATCCTG CACCGTCGTG CGCACCGCTG GCTATTCGCC
ATCGGTGCAC TGGTGGCGCT GGGGGACGCG GCGAATGCGT CGGAGCTGCA GGGCGCACTG
GGCGCGCCGC TGGCGGAGCT GGTCTCGATG CTCGCCAATG TCGTGGCGGC GTTGCTGACG
GGCGCCTTTG CGGTACGCTT CAAGCGGCCC GTGAAGCACT TGATCCGCAA CCGTCCTTAC
CGCTATCGGC GCGACAAGCG CGCTTCGAGC GAATTGATTC AGCTCGTCGG CGCGCTGTGG
CATGTGCCGG TATTGCTCAT GGTAGTGGTA TCGCTGGTGG CGATCCTGAC CTCGCAGGGG
GACTCGCGCA GTGTCTTCGC CAAGGCGATC GTCACCGCGG GATTGCTGGT GGTGACCCTG
ATCGTCAACG GGCTGGTGCA TCGTCATTCC GAGCAGCCTT CCAAGCAGCG GCGCCAGTCG
CAGTATCGGC GACGCCTGGT GCGCTTCGGC TACACGCTGG CGCACCTGGT CAGCTGGGCG
GCGTTCGCCG AGCTGGCGAT GCGTGTCTGG GGATTGTCGC TGCTGGCGTT CGGCAGTGAC
GAGGGCATCA GCCAGCGCAT AGGCCAGTCG TTGCTCAGCA TCGGCATGAC GCTGCTGCTG
GCCTGGCTGG TCTGGATCCT CGCCGATACC GCGATCGAGC GCGCGCTACT GTCGTCCAAG
CGAGGGCGCA GCGGAAGAGC CCAGAGCACC CGCGCCCAGA CCATCACGCC GCTGATACGC
AATGTCGTCT TCGCGACCAT CGTGATCATC GCCTTCATCG TGGCGCTGGC CAATCTGGGC
GTCAACGTGA CGCCACTGCT GGCCGGGGCC GGTGTGATCG GCCTGGCAGT GGGGTTCGGG
GCGCAGACCC TGGTGCAGGA TCTGATCACG GGGCTTTTCA TCCTCATCGA GGATTCGCTG
GCCATCGACG ATTTCGTCGA TCTGGGCGGT CACATGGGAA CGGTCGAGGG GCTGAGCCTG
CGGACCGTGC GCCTGCGTGA CCTGGATGGC ATCGTGCATA CGATCCCCTT CAGTCAGATC
AAGGGGATCC AGAATTTCTC GCGGGAATTC GGGATTGCCT TGATGCGCGT GCGGGTCGCG
CATCACATGA AGGTCGACGA GGCCATCGCG GTGGTGCGCG ACGTGGCCGA AGACCTGCGC
CGCGACCCGA TGATGCGGCA TTATATCTGG TCGCCGCTGG AGCTGCAGGG TGTCGAGAGC
TTCGATGCCG GCGCGGCGAT ACTGCGTTTC CGCATGCGGA CCGCGCCGCT GATGCAGTGG
GACGTGGCGC GAGCCTTCAA TCTGCGGCTC AAGCGGCGCT TCGATGAACT GGGACTGGAC
GTGGCGATGC CGCGCATGAG CGTGAGCCTG GAGTCTCCCA TTCCCGAGGC GTCCGGGGGC
ACCGCCGCAT CGGCCTCGCG CTCGGTGGGC ATGCCTCAGG CCACGGGCGG CCCTGCGGAA
GAGGCGCCTC CCGGTACCGG CTGA
|
|---|
| Protein sequence | MPWLFYVMTP VGYGARLGHS VDIHEIREVS MLGGATRWGR GLVLLCALLF SGWAWGQAAS
PLSSLAGGGG QQEDAAPSPE QARESLDGVI SMLEDQQRRE ALLSQLRELR ASLEGVSNES
DPRTPSGLLG AIADSLTSLG ESGEAVTPLE YWQSMGERAG NTLMQRVASL ESALHLIGDF
AWVLSLWGGS AALLVLLGRA LAKRMNMQLA LSAEPSTWML IRHMIRRLLP WGLAFALTLG
VVHGMASTLG MTLAMVIAYL TLCGILFTAV CEVVFSLFAS GHRRVALRIL HRRAHRWLFA
IGALVALGDA ANASELQGAL GAPLAELVSM LANVVAALLT GAFAVRFKRP VKHLIRNRPY
RYRRDKRASS ELIQLVGALW HVPVLLMVVV SLVAILTSQG DSRSVFAKAI VTAGLLVVTL
IVNGLVHRHS EQPSKQRRQS QYRRRLVRFG YTLAHLVSWA AFAELAMRVW GLSLLAFGSD
EGISQRIGQS LLSIGMTLLL AWLVWILADT AIERALLSSK RGRSGRAQST RAQTITPLIR
NVVFATIVII AFIVALANLG VNVTPLLAGA GVIGLAVGFG AQTLVQDLIT GLFILIEDSL
AIDDFVDLGG HMGTVEGLSL RTVRLRDLDG IVHTIPFSQI KGIQNFSREF GIALMRVRVA
HHMKVDEAIA VVRDVAEDLR RDPMMRHYIW SPLELQGVES FDAGAAILRF RMRTAPLMQW
DVARAFNLRL KRRFDELGLD VAMPRMSVSL ESPIPEASGG TAASASRSVG MPQATGGPAE
EAPPGTG
|
|---|
| |