Gene Csal_0944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0944 
Symbol 
ID4026798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1058672 
End bp1060504 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content65% 
IMG OID637966121 
Productpotassium efflux system protein 
Protein accessionYP_573000 
Protein GI92113072 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.728384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTCT TTGCCGAGGC GGCGGTGTTG CTGGGAGCGG CGATCATCGC CGTGCCATTG 
TTTCAACGCC TGGGACTGGG CTCGATCCTG GGCTATCTCG CCGTGGGGCT GCTGCTGGGG
CCCTCATTGA TCGGCTTCAT CAGCGAACCG GAGGAAGTAC TGCATTTCTC CGAATTCGGC
GTCGTGATGT TGCTGTTCAT CATCGGGCTG GAGCTGGAAC CGTCGCGCCT GTGGGGGATG
CGGAAACGCC TGTTCGGACT GGGCCTGCTT CAATTGTTCG GCTGCGGCGT GCTGCTGACG
CCGATCGGCC TGGCGTTGGG CCTGAGGTGG GAGCTGGCGG TACTGCTGGG ATTGATTCTG
GCCTTGTCCT CCACGGCCTT TGCCCTGCAG GTGCTCAACG AGCAGCGTCG CCTGGCCACA
CCGCACGGGC AGACGGCGTT CGCGATCCTG CTCTTCCAGG ATCTGGCGGT GATTCCCTTG
CTGGCCTTGC TGCCGCTGTT CGCGGGTGGG GTGAGCGCAC AGGGCGGCGA CATGTGGCTC
GACATCGGCA AGGGCGTGGG CATGGTGCTG GCCGCGATCG TGTTCGGTCG TCTGGTGTTT
CCCCGCGTGC TGGCGCTCAT CGCGCGTAGC GGCGTGCATG AGGTCTTCAC CGCCGCGGCC
CTGTTCCTGG TGCTGACCCT GGCCTTGGTG ATGGATTGGG CGGGCCTGTC CATGGCGCTG
GGCGCCTTCC TGGGAGGCGT CATGCTGGCG GACACGATTT ATCGCCATGA ACTGGAAGCC
AACATCGAGC CGTTCAAGGG CATTCTGCTG GGCCTGTTCT TCATGGCCGT GGGCATGTCG
GTCAACCTGG CGCTGGTCTT CGACAATGTC TTCTGGGTGC TGGGAATCAC CCTGGTGCTG
TTGGCGGCCA AGCTCGTCAT CATCGCCCTG GTGGGCATGG CGGCACGCTT GCCGCGACAA
GAGATTCCGC GCCTGGCAAC GGTGATCGCG CAAGGAGGGG AGTTCGATTT CGTGCTGCTC
AGCGCGGCGG TCAGCGCCGG CGTGTTCGAT CAGCGCATCG CCAGCCTGTG CATCGCCGCG
GTGACCTTGA GCATGGCCTT GACGCCGTTC TTGTATCGTG GCGGCAACCA CCTCGCCGAC
CGCATGCGGG AGACCCGCCC TTACGACAAC GATTTCGGGG ACGAGACGCC TCCCGTGCTG
ATCGCGGGGC TGGGGCGTTT CGGCCAGATG GTGGCCCGTG TGCTCAAGCT GCAGGACATC
AGCTTTACCG CGCTCGACCC CAACATCACG CAAGTGGAAT TCATACGGCG CTTCGGCTCG
CGTATCTACT ACGCCGACGC CACGCGGCTG GATGTGCTGC GCTCGGCGGG ACTGGAACAC
GCCCGCGTGC TGGTGATCGC CGTCGACGAC GAGGAGGCGG CGCTGACCAT CGCCCGGCAG
GTGCGTACTC ACTATCGCCA GGTCAAGGTC TTCGCGCGTG CGCGCAACCG CCACCATGCC
TGGCAGCTCA TGGAAGCCGG CGTCGATGCC GTGGTGCGCG AGACCTTTGC CTCGAGCATG
GAGATGAGCG TCGAGGTGCT CAAGGGACTC GGCTACCCGG GATCCAATGC CCTGGATGCC
GTGCGCACGT TCCGCGACTT CGACAATCAG CTGTTGGCCA GGACCTTCAT GCATCGGCAT
GATTCGGAAG CGTTGATGGC GACGGAGCGC GCGGCCATGG CGGAGTTCCA GACACTGTTC
CAGCAGGAAC TGGGCCAAGG CCGAGGGCAG GAGGAGGCCG CCGAGCCCTC GGACGTGTCG
GTCGAAACGT CGACCGAGGA CGTTCGGCGG TAG
 
Protein sequence
MTFFAEAAVL LGAAIIAVPL FQRLGLGSIL GYLAVGLLLG PSLIGFISEP EEVLHFSEFG 
VVMLLFIIGL ELEPSRLWGM RKRLFGLGLL QLFGCGVLLT PIGLALGLRW ELAVLLGLIL
ALSSTAFALQ VLNEQRRLAT PHGQTAFAIL LFQDLAVIPL LALLPLFAGG VSAQGGDMWL
DIGKGVGMVL AAIVFGRLVF PRVLALIARS GVHEVFTAAA LFLVLTLALV MDWAGLSMAL
GAFLGGVMLA DTIYRHELEA NIEPFKGILL GLFFMAVGMS VNLALVFDNV FWVLGITLVL
LAAKLVIIAL VGMAARLPRQ EIPRLATVIA QGGEFDFVLL SAAVSAGVFD QRIASLCIAA
VTLSMALTPF LYRGGNHLAD RMRETRPYDN DFGDETPPVL IAGLGRFGQM VARVLKLQDI
SFTALDPNIT QVEFIRRFGS RIYYADATRL DVLRSAGLEH ARVLVIAVDD EEAALTIARQ
VRTHYRQVKV FARARNRHHA WQLMEAGVDA VVRETFASSM EMSVEVLKGL GYPGSNALDA
VRTFRDFDNQ LLARTFMHRH DSEALMATER AAMAEFQTLF QQELGQGRGQ EEAAEPSDVS
VETSTEDVRR