| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0894 |
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| Symbol | |
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| ID | 4027264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 1005530 |
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| End bp | 1007347 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637966071 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_572950 |
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| Protein GI | 92113022 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.396651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGTCA TGGGGAATTG GCCTAATGGG GCCATGACCC ATCCGTGCCC TCCAGCTTCC
ACTACCGAGG CGACCGATCC GAGTCTGTCG GCCATCGTGC GGGAAGGGCG TATCGACGTC
CATTTTCAGC CGATCGTGGC CATTCGGTCG GGGCGTGTCT TCGCCTACGA GGCATTGTCG
CGTGGCCCGC ACGATACCGT ATACGCGCAT CCGCTGACCA TGTTCGAGGC GGCACGCAAG
CAGTCGCTGC TCGCCCCGCT CGAAGCGGTA TGCCGTCATC GTGCGATCAC GGCCTGGGCC
GACCAGGAGC TCGATGAACT GTTGTTCATC AACGTGTCGC CGGAAGTCCT GCTCGATCCA
AAACACCGCA GTGGCGAAAC CCTGCGCCTG TTGACGCGAC TCGGCATTCC GCCGCATCGC
TTGGTGATAG AGCTCACCGA GCAGTCCCCG GGCATCGATC CCGATCTCAT GGCGGAAGCC
GTGCGTCACT ATCAATCGAT GGGCTTCACG ATCGCGCTGG ACGATCTGGG CGAGGGGTAT
GCCAGCCTGC GTCTGTGGTC ACAGATTCGC CCCGACTTCG TCAAGCTCGA TCGACATTTC
GTCAGCGAGC TGGATCGCGA TCGCGTCAAA CGCCGGTTCG TGAGGGCGTT TCTGGACGTT
GCCCATGGCG TGGGGTCGCG TGTCATCGCC GAAGGCGTGG AGCGGGAAGA AGAGCTCGAT
TGCCTGCATG CACTGGGGGC GGATTACTAT CAAGGCTGGT TGTTCGCGCG GCCGTCGCCG
ACACCGAAAG CTACGCGTCT TGAGTTGAAC GAGCGCCTTG CCCAGCTGGC CGCACGGCAA
GAAAGCCCGC TGCAGGAGTG TGTGGCGCGA CATGTCTGCA AGTGGCAGCC TGCGCTCGCC
ATGACGGTGA CCGTCGCCGA AGCGAGCGAA CGCTTCAGTG CCGCGCCGGA CGTGGCAGCG
ATGGCCGTGG TGGACGACCA GGAAATGCCC ATCGGCGTCT TGACGCGTGA AGCGGTGATG
GCGCTGGTGG GCAAGCGCTT CGGCTTCGAC CTGCACGGTC GCGACCCCGT GACCAGCGCG
ATGCACGTGG CGCCGCTGTG CGTCGAGGTC ACGGAGCCCC TCGATCAGGT ATCGCGCAAG
GTGACGGGAC GCGACAGCGA CCAGCGCGCC GAGCCTTTCG TCGTCACCCA GCGCGGCCGC
TACGTGGGCA TGGGACAGAT CGTGGCATTG CTGCAGCAGA TCACCGAGCA GAAGGTGGCG
ATCGCGCGTC AGGCCAATCC CTTGACGCAA TTGCCGGGCA ATGCGCCCGT GCGTGCGGCG
CTGGATGCCT TCGTTCGTGC GCGGAAATCC TTCGTGGCCT GCTATCTCGA CCTCGATCAC
TTCAAGCCGT TCAACGACCG CTTCGGGTAT GCCCTGGGCG ACCAGGTGTT GCTGGATGTC
GCCGGCACGC TGGGCGAGGC CAAGGGGGCG CATGATTTCC TGGGGCATCT GGGCGGCGAT
GACTTCGTGC TGTTATTGGC GCCTCGAGAA CGGCTGCAGT GTTTCCTGGC GGCGATTCAA
GCGGAGTTTT CGGCGCGTGT CGCCTCGCGG GTGCCGGCTG CCGTGGTCGA GGAGGGCGGT
TTCACCGCAC AGGACCGCTT CGGGCAACAA CGCTTCTTTC CGCTGCCGCG GCTCACGGTG
GCGGCCTTGA ACGTGCCGGG CGGGCTGGCC CCCCAGAGTT TCGGCGATTG CTGGGGACCG
CTCAAGCAAA GTGCCAAGCG TACCGAGAAT GGCCGCCTGG TCGTGCGCAT GCGGGGAGAA
ACCTTCGCCG CGTCGTGA
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| Protein sequence | MNVMGNWPNG AMTHPCPPAS TTEATDPSLS AIVREGRIDV HFQPIVAIRS GRVFAYEALS
RGPHDTVYAH PLTMFEAARK QSLLAPLEAV CRHRAITAWA DQELDELLFI NVSPEVLLDP
KHRSGETLRL LTRLGIPPHR LVIELTEQSP GIDPDLMAEA VRHYQSMGFT IALDDLGEGY
ASLRLWSQIR PDFVKLDRHF VSELDRDRVK RRFVRAFLDV AHGVGSRVIA EGVEREEELD
CLHALGADYY QGWLFARPSP TPKATRLELN ERLAQLAARQ ESPLQECVAR HVCKWQPALA
MTVTVAEASE RFSAAPDVAA MAVVDDQEMP IGVLTREAVM ALVGKRFGFD LHGRDPVTSA
MHVAPLCVEV TEPLDQVSRK VTGRDSDQRA EPFVVTQRGR YVGMGQIVAL LQQITEQKVA
IARQANPLTQ LPGNAPVRAA LDAFVRARKS FVACYLDLDH FKPFNDRFGY ALGDQVLLDV
AGTLGEAKGA HDFLGHLGGD DFVLLLAPRE RLQCFLAAIQ AEFSARVASR VPAAVVEEGG
FTAQDRFGQQ RFFPLPRLTV AALNVPGGLA PQSFGDCWGP LKQSAKRTEN GRLVVRMRGE
TFAAS
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