Gene Csal_0868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0868 
Symbol 
ID4027871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp972183 
End bp973478 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content62% 
IMG OID637966037 
Productmanganese transporter NRAMP 
Protein accessionYP_572924 
Protein GI92112996 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1914] Mn2+ and Fe2+ transporters of the NRAMP family 
TIGRFAM ID[TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAACCG GTAGCATGCT GCGTACGATT TCCGATAGCG CCATACGTGA TCAGGCCGCC 
TCGACGCTAA GCGGCAAGCC GCGGCGCTGG AGCTGGACGG CCTTCTTCGG CCCCGCCCTG
ATCGCTGCCG TGGCCTATAT CGACCCCGGC AACTTCGCCA CCAACATCGA AGCCGGCTCG
CGCTACGGCT ATACCCTGCT GTGGGTCGTC CTGGCCGCCA ACCTGATGGC CATGCTGATC
CAGACGCTGT CGGCCCGCCT GGGGCTCGCC ACCGGTCAGA ACCTGCCTCA GGTGATACGC
GCCCGCTATC CACGTCCGCT GGTGTGGTGC TATTGGGTAC AAGCGGAGAT CGTGGCGATC
GCCACCGATC TCGCCGAGTT TCTCGGCGCC GCGTTGGCCT TCCACCTTCT CTTCGGCCTG
TCATTGATGG AAGGCGCCCT GCTCACCGGC ACGATCACCT ATCTGGCCCT GCACCTCTAC
CGCTATGGCT TTCGCCTGAT GGAGATCCTG ATCGGCGCCA TGATCCTCGC CGTCGCGGGT
GGCTTCATTC TCGAACTGGT GCTGAGTCGG CCGGAACCGG CGCCCCTGCT CAAGGGGCTG
CTGATCCCGG GGTTTCCCGA TGGCTATGCC CTGTACCTGG CGGCCGGCAT CCTCGGCGCC
ACGGTCATGC CCCATGTCAT CTACCTGCAC TCGGCACTGT CGCAGCAGCG AATTCAGGTC
AAGGACGACG CCCATCGCTT GCGCTTGATG CGCTATTATC GGCTCGACGT GATCCTCGGC
ATGGCCATTG CGGGTCTGGT CAACCTCAGC ATGCTGGCCA TGGCAGCGGC CGTGTTCCAT
GCCACCGGCC GCCTCGACGT CGCCACCATC AGTGACAGCT ATCTATTGCT CGCTCCGGTG
GTGGGCCAGG TCACGGCCAG TCATGTCTTC GGTCTTGCCC TATTGTTGGC TGGCCTGTCG
TCCTCGATTG TCGGTACACT GTCGGGCCAG GTGATCATGC AGGGGTTCGT CAACGTCAGC
ATACCGCTGT GGCTACGTCG CCTGGTGACA ATGCTGCCGG CTCTGGCCGT CATCATGCTG
GGCATTTCCG AACAGAAGGC GCTGGTCGCC AGTCAGGTCA TTCTCAGTTT CGGCATCCCC
TTTGCACTCG TCCCCTTGCT TTGTTTCACG GCCAATCGCC AGATCATGGG CAACCTGGTC
AACCGCAAGA GCGTCACCGG CGTGGGCACC GTGGTATGCA CTTTGATCGT CGCACTCAAC
GTGTACGTGC TATTTTCTAC GTTCACGGGA CACTGA
 
Protein sequence
MRTGSMLRTI SDSAIRDQAA STLSGKPRRW SWTAFFGPAL IAAVAYIDPG NFATNIEAGS 
RYGYTLLWVV LAANLMAMLI QTLSARLGLA TGQNLPQVIR ARYPRPLVWC YWVQAEIVAI
ATDLAEFLGA ALAFHLLFGL SLMEGALLTG TITYLALHLY RYGFRLMEIL IGAMILAVAG
GFILELVLSR PEPAPLLKGL LIPGFPDGYA LYLAAGILGA TVMPHVIYLH SALSQQRIQV
KDDAHRLRLM RYYRLDVILG MAIAGLVNLS MLAMAAAVFH ATGRLDVATI SDSYLLLAPV
VGQVTASHVF GLALLLAGLS SSIVGTLSGQ VIMQGFVNVS IPLWLRRLVT MLPALAVIML
GISEQKALVA SQVILSFGIP FALVPLLCFT ANRQIMGNLV NRKSVTGVGT VVCTLIVALN
VYVLFSTFTG H