| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0854 |
|---|
| Symbol | |
|---|
| ID | 4027818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 954365 |
|---|
| End bp | 954958 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637966023 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_572910 |
|---|
| Protein GI | 92112982 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.382048 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCG ATCCTCATCA TTGGCTGACG GCGGCGCGGC ACGTCGCCTC GCCCAATCAT
AACGCACGGC CCGAAGACGA GGTGTCGGCG CTGGTGCTGC ATTCCATCAG CTTGCCCCCG
GGGCGCTTCG GGGGCGATGC CATCGAACGG TTGTTCACCA ATCGTCTCGA TCCCGCCGCG
CATCCCTACT TTGCCACGAT CCATGCCCTG CGGGTGTCGG CGCATGTGCT GATCCGCCGC
GATGGCGAAG CGGTACAGTT CGTGGGCTTC GACCGCCGCG CCTGGCATGC CGGGCGCTCG
CGCTGGTGGG ACGGACATCG CGAACGTCGC GAACTCAACG ATTTCAGCAT CGGCATCGAG
CTGGAAGGCG ACGAGATTCA CGCCTACCGC GAGGCACAGT ATCGTTGCCT GGCGCGGGTG
TTCCTGGCAC TGCATGCGCG CTATCCCGCC TTGACGCTGG CGCGCGTGAC CAGCCACGCG
CGAATTGCGC CGCTGCGCAA GACCGACCCG GGGCCGGCCT TCGACTGGGC CTACTTTCGC
CAGTGCGTGC AGGCGTTGAC GACGCAGGCA AGCGATGCCC GGGCATGCGT GTAA
|
|---|
| Protein sequence | MQVDPHHWLT AARHVASPNH NARPEDEVSA LVLHSISLPP GRFGGDAIER LFTNRLDPAA
HPYFATIHAL RVSAHVLIRR DGEAVQFVGF DRRAWHAGRS RWWDGHRERR ELNDFSIGIE
LEGDEIHAYR EAQYRCLARV FLALHARYPA LTLARVTSHA RIAPLRKTDP GPAFDWAYFR
QCVQALTTQA SDARACV
|
|---|
| |