| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0654 |
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| Symbol | |
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| ID | 4026339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 732371 |
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| End bp | 734005 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637965824 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_572714 |
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| Protein GI | 92112786 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACA ATGGAAGGCA ACGCGTATTT ATCGTCTCCG CCTTGATCGT CGCGGTTCTC
GTCGCCATCG GGGCGGCGTT TCCCGAGCGT TTCGGCAGCG CGGCGTCGTC GGCATTATCC
GGCATTTCGC ACTATTTCGG GTGGTTCTAC CTGTTTTCGG TGTTCGGGTT CGTGGTGTTC
TTGCTGACGC TGGCGTGCAG CAAGTATGGC AAGATTCGGC TCGGCCCCCA GGACAGTTCG
CCCTCCTACA GTTTCTTCTC GTGGGTCAGC ATGCTGCTGG CGGCGGGGTT CGGCGTCGGC
CTGGTGTTCT ACGGCATGGC CGAGCCGATG ACGCACTTCC TCGAACCGCC CTACGGTGAT
GTGGAAGGCG GTACCGAAGA GGCGGCACGC TATGCCATCC AATACAGCTT CTTCAACTGG
GGCATTCATC AGTGGGCCGC GTTTTCCGTG GTGGGGCTGA TCATTGCCTA TTATCAGTTC
CGCAAGGGCC AGGCGGGGCT GGTCTCCAAC GTGCTTTCGA GCATGACCGC CAAGCGTCCC
AAGATGCGCA AGCTGGGACC GGCGCTGGAT GTCTTTGCCG TGGTCGCGAC GGTGATGGGG
GTGGCGACCT CCATCGGTCT GGCGGTGCTG CAGATCAACG GCGGCCTGCA TGCGGTCTTC
GGTGTCGAAG AGGGCATGAC GTGGCAGTTC ATCATCATGG GGGCGATGTT TTTGTGTTAC
ATGGCCTCCA CCTGGTCGGG GCTGGACAAG GGCATCAAGC GCCTTTCCAA CCTCAACATG
GCGCTGTGCT TCGCGTTGAT GTTCTACGTG CTGTTCACGG GCCCCACCGT GGCCATTCTC
GAGACCATCA CCCTGGGGAT CGGCGATTAC CTGCAGAACA TCGTGGGCAT GAGCCTGCGG
GTCGCGCCGT ATAGCGACAA CACCTGGGCC AGCAACTGGA CGATCTTCTA TTGGGCCTGG
GTCATCGCCT GGTCGCCGTT CGTGGGCACC TTCGTGGCGC GCGTCTCGCG TGGGCGCACC
ATCAAGGAGT ACGTGTTCGG CGTGTTGATC GTGCCGCCGC TGCTGGCCTG CCTGTGGATC
GGGGTCTTCG GCGGCGCGGC GCTCAACATG GAGCTCACCG GCGACGTGGG ACTGGCCTCG
GCCACGGCAG ACAACATCAC GGTGGCGCTG TTCCGGATGT TCGAGCTGAT GCCGTTCTCC
AATGTGCTGT CGGTGGTGGC GCTGTCGCTG ATCTTCATTT TCCTGGTGAC CTCGGCGGAC
TCGGCGACCT ATATCGTGTC GCAGATGACC GATGGCGGTT CGCTGAATCC GCCGCTGTTC
AAGCGGGTGA TCTGGGGGGT ACTGATCGCG GCGATCTGTC TGACCCTGCT GATTGCCGGC
GGGTTGAATG GCCTGCAATC GGCGGCGGTG CTGGCGGCGT TACCCTTCAC CTTCATCCTG
TACGGCATGA TTGCCGTGCT GGTGAAGGAA TTGCGCGCCG ATCGCAAGGC GATGCTGACA
TCGCTTTATC ATCGTCATGG GGAAACGCCG GTAGGCGCCG ATGCCTTCGA GGCGGAAACG
CTGGCGGAAG CCGAGCGGTA CCGGCGTGCA CCGAACGTGG TCAACCGGCG CATCAATACG
CGCGACGGTA CCTGA
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| Protein sequence | MANNGRQRVF IVSALIVAVL VAIGAAFPER FGSAASSALS GISHYFGWFY LFSVFGFVVF
LLTLACSKYG KIRLGPQDSS PSYSFFSWVS MLLAAGFGVG LVFYGMAEPM THFLEPPYGD
VEGGTEEAAR YAIQYSFFNW GIHQWAAFSV VGLIIAYYQF RKGQAGLVSN VLSSMTAKRP
KMRKLGPALD VFAVVATVMG VATSIGLAVL QINGGLHAVF GVEEGMTWQF IIMGAMFLCY
MASTWSGLDK GIKRLSNLNM ALCFALMFYV LFTGPTVAIL ETITLGIGDY LQNIVGMSLR
VAPYSDNTWA SNWTIFYWAW VIAWSPFVGT FVARVSRGRT IKEYVFGVLI VPPLLACLWI
GVFGGAALNM ELTGDVGLAS ATADNITVAL FRMFELMPFS NVLSVVALSL IFIFLVTSAD
SATYIVSQMT DGGSLNPPLF KRVIWGVLIA AICLTLLIAG GLNGLQSAAV LAALPFTFIL
YGMIAVLVKE LRADRKAMLT SLYHRHGETP VGADAFEAET LAEAERYRRA PNVVNRRINT
RDGT
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