Gene Csal_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0610 
Symbol 
ID4029079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp679229 
End bp679879 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID637965778 
Productpilus assembly protein, PilO 
Protein accessionYP_572671 
Protein GI92112743 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3167] Tfp pilus assembly protein PilO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.12175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGC GTACCCAGTG GCGACAGCTG CGCGAGGTCG AGTGGCGCGA TCTCGACCTC 
AAGGAGGCCG GGAGCTGGCC TGCGTTATTG CAAGGATTGT GTCTGATCGT GCTGTTCGTG 
GCGGTCTTCT GGGTCGCTCA ATGGTTTCTG GCCGCGCCGC GCCAGGCCAC CCTGGATTCG 
CTGCAGGCAC GCGAACGGAC GTTGCTGGCG GAATACGAGG CCCGAGCCTA CCAGGCCGCC 
AATCTCGATC AGATGCGGAC CCAGATGGCG GAGCTCGATG CGCGCATGCA GGCGTTGCTG 
GAAATGTTAC CCAGCGATGC GGAAATCCCC GCCCTGCTGG ACGACATCAG CGATGCCGCG 
CAGGATCACC AGCTCGTCAT CGATTCGATC CGGCTGCGTG CGCCGGTGCC GCAGACGTTC 
TATATCGAGC AACCCTTCGA CATCGAGGTG CGCGGCGGCT ACCACGAGAT CGCGGCATTT 
CTGGGCAGCG TGGCGGCGTT GCCGCGTATC GTCACGCTTC ACGATTTCAC GCTGACGCCG 
GTGAACGAGG GCGACACGCT GCGTCTATCG TTGCTGGCGC GCACCTACAG CTACCGCGAG 
GATGCCGATC CCAAGGCACG CGCCGGGAAC CCGGAGGGCG GCGATGATTG A
 
Protein sequence
MSLRTQWRQL REVEWRDLDL KEAGSWPALL QGLCLIVLFV AVFWVAQWFL AAPRQATLDS 
LQARERTLLA EYEARAYQAA NLDQMRTQMA ELDARMQALL EMLPSDAEIP ALLDDISDAA 
QDHQLVIDSI RLRAPVPQTF YIEQPFDIEV RGGYHEIAAF LGSVAALPRI VTLHDFTLTP 
VNEGDTLRLS LLARTYSYRE DADPKARAGN PEGGDD