Gene Csal_0421 details

Gene Information

• Locus tag: Csal_0421
• ID: 4025885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 479790
• End bp: 480428
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637965579
• Product: 50S ribosomal protein L3P
• Protein accession: YP_572482
• Protein GI: 92112554
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0087] Ribosomal protein L3
• TIGRFAM ID: [TIGR03625] 50S ribosomal protein L3, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00399818
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTATCG GTTTGGTCGG TAAGAAGAGC GGCATGACCC GCATCTTCAC CGAGAATGGC 
GCCTCCGTGC CCGTAACCGT TATCGAAGTC GAGCCGAATC GCGTGACCCG CGTCAAGACC 
GTCGAAAGCG ACGGCTACAG CGCGGTTCAG GTGACTTCGG GTTCCCGCAA GGCCAAGCAT 
CTGACCAAGG CCGCCGCAGG CCAGTATGCC AAGTCAGGTG TCGAGGCCGG TCGTTCATTG 
ATGGAGTTCC GCCTCGCAGA AGGCGAAGAA GCTCCGGAAG TGGGCGGCAA CATCACCGTA 
TCCCTCTTTG AAGCCGGTCA GAAAGTCGAC GTGACTGGTA CCTCTAAAGG CAAGGGCTTC 
CAGGGCGCCG TCAAGCGCTG GAATTTCCGT ACCCAAGACA ATGGTCACGG CAACTCGCTC 
GCGCACCGCG CACCGGGCTC CATCGGTCAA TGCCAGACGC CGGGTCGCGT CTTCAAGGGC 
AAGAAGATGG CCGGTCAGCT GGGCAACGAG CGTGTCACAG TCCAGAGCCT GGAAATCGTG 
CGCGTCGATG CCGAGCGTAA TCTGCTGCTG GTCAAGGGCG CCGTACCGGG CGCGACTGAC 
TGCGAAGTCA TCGTACGCAG TGCCGTCAAA GCTCGCTGA 

 

Protein sequence

MTIGLVGKKS GMTRIFTENG ASVPVTVIEV EPNRVTRVKT VESDGYSAVQ VTSGSRKAKH 
LTKAAAGQYA KSGVEAGRSL MEFRLAEGEE APEVGGNITV SLFEAGQKVD VTGTSKGKGF 
QGAVKRWNFR TQDNGHGNSL AHRAPGSIGQ CQTPGRVFKG KKMAGQLGNE RVTVQSLEIV 
RVDAERNLLL VKGAVPGATD CEVIVRSAVK AR