Gene Csal_0419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0419 
Symbol 
ID4025883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp478004 
End bp479197 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content62% 
IMG OID637965577 
Productelongation factor Tu 
Protein accessionYP_572480 
Protein GI92112552 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00911087 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAAGG AAAAGTTTGA ACGTAATAAA GCGCACATCA ACGTTGGCAC CATCGGTCAC 
GTCGACCATG GCAAGACCAC GCTGACTGCG GCACTGACTC GCGTTTCCGC GGAGGTCTTC
GGCGGCGACT GGCGCGAATT CGACACCATC GACAACGCAC CGGAAGAGCG TGAGCGCGGT
ATCACCATCG CCACCGCTCA CGTCGAGTAC CAGTCCGAAG AGCGCCACTA CGCGCACGTC
GACTGCCCGG GGCACGCCGA CTACGTCAAG AACATGATCA CCGGTGCCGC TCAGATGGAT
GGCGCCATTC TGGTCTGTTC CGCAGCTGAC GGCCCCATGC CGCAGACTCG CGAGCACATC
CTGCTGTCTC GCCAGGTCGG CGTTCCGACC ATCGTCGTGT TCCTGAACAA GGCCGACATG
GTCGACGACG AAGAGCTCCT CGAGCTGGTC GAAATGGAAG TTCGTGAACT CCTCAACGAG
TACGACTTCC CGGGCGACGA CTGCCCGATC ATCACCGGTT CCGCGCTGAT GGCGCTGGAA
GGCAAGGACG ACAACGGCAT GGGTACCACT GCCGTCGCCA ACCTGATCAA GGCCCTGGAT
GCCTACATCC CGGAGCCGGA GCGTGCCATC GACCAGCCGT TCCTGATGCC GATCGAAGAC
GTGTTCTCGA TCTCCGGCCG CGGTACCGTC GTGACCGGTC GTGTCGAGCG CGGTATCGTC
AAGTCTGGCG AAGAAGTCGA GATCGTGGGT CTCAAGGACA CTGCCAAGAC GACCGTTACC
GGTGTCGAGA TGTTCCGCAA GCTGCTCGAC GAAGGTCGTG CCGGCGAGAA CATCGGCGCG
CTGCTGCGCG GCACCAAGCG TGACGACGTC GAGCGTGGCC AGGTGCTGGC CAAGCCGGGC
ACCATCACGC CGCACACTGT CTTCGAAGCC GAAGTCTATG TGCTGTCCAA GGAAGAAGGC
GGTCGTCACA CGCCGTTCTT CAAGGGCTAT CGTCCGCAGT TCTACTTCCG GACCACTGAC
GTGACCGGTA CCTGCGAGCT GCCGGAAGGC GTCGAAATGG TCATGCCGGG CGACAACGTC
AAGATGACCG TGACCCTGAT CGCGCCGATC GCCATGGAAG ACGGCCTGCG CTTCGCTGTT
CGCGAAGGCG GTCGTACCGT AGGCGCCGGT GTCGTCGCCA AGATCGTCCA GTAA
 
Protein sequence
MAKEKFERNK AHINVGTIGH VDHGKTTLTA ALTRVSAEVF GGDWREFDTI DNAPEERERG 
ITIATAHVEY QSEERHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPT IVVFLNKADM VDDEELLELV EMEVRELLNE YDFPGDDCPI ITGSALMALE
GKDDNGMGTT AVANLIKALD AYIPEPERAI DQPFLMPIED VFSISGRGTV VTGRVERGIV
KSGEEVEIVG LKDTAKTTVT GVEMFRKLLD EGRAGENIGA LLRGTKRDDV ERGQVLAKPG
TITPHTVFEA EVYVLSKEEG GRHTPFFKGY RPQFYFRTTD VTGTCELPEG VEMVMPGDNV
KMTVTLIAPI AMEDGLRFAV REGGRTVGAG VVAKIVQ