Gene Csal_0362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0362 
Symbol 
ID4026030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp405519 
End bp406670 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content64% 
IMG OID637965511 
Productinner-membrane translocator 
Protein accessionYP_572423 
Protein GI92112495 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATA TGAACCAAAC CGCTTCCAGC TCGCGTTCGC AAGGCGGCGG ACGTCGTTTC 
GACGTGGCGC GCATGCTGCT GGAGGGGCGC GCTTTCTTCG CCTTGATCGC GATCATCGTC
ATCTTCTCGT TGCTGTCGCC TGTCTACTTT TCGACCAGCA ACTTTCTGAC CATGTCGTCG
CACGTCGCCA TCTTCGGGTT GCTGTCGCTG GGGATGTTGC TGGTGATCTT GACGGGGGGC
ATCGATCTGT CCGTGGGGTC CACGCTTGGC CTGGCGGGCG TGTTCGCGGG ATTTCTGATG
CAGGGCGTCT CGTTCGAAGC CTTTGGCGTG GTGGTGTATC CGCCCGTTTG GGTGGTGGTC
GTGCTGACGT GTGGCCTGGG GGCCCTGGTC GGAGCGATCA ACGGCGTTCT CATCGCCTAT
TTCAAGGTGC CGGCGTTCGT GGCGACCTTG GGGCTCTTGT ACGTGGCCCG TGGCGTTGCG
CTGCTGATGA CCGATGGCTT GACCTACAAC AACCTCGGTG GAAGCGAGGC GCTGGGCAAT
ACCGGGTTCG ATTGGCTGGG GTTCAATCGG CTGTTCGGCA TCCCGGTCGG CGTGCTGATC
CTGGCGGCCG TGGCGATCGC CTGCCTGTTG CTGCTGTCGC GCACGCCGTT CGGGCGCTGG
GTGTATTCCA CCGGCGGCAA CGCGCGGGCC GCCGAGCTTT CCGGGGTGCC GGTCAAGCGC
GTGCAGGTCT CGGTGTATGT GCTGTCCGGT ATCTGCGCGG CGATCGCCGG CCTGGTGCTG
TCCTCGCAGT TGACCTCGGC GGGGCCGACG GCCGGCACGA CCTATGAGCT CACCGCGATC
GCGGGGGTGG TCATCGGTGG CGCGGCACTC ACCGGTGGTC GCGGCAACGT GCGCGGCACC
CTGCTGGGCG CCTTCGTGAT CGGGTTTCTC TCCGACGGGC TGGTGATCAT CGGGGTCTCG
TCGTACTGGC AGACCGTGTT CACCGGGGCC GTCATCATTC TCGCGGTTCT GCTCAACAGC
ATTCAGTACA GCGGTCGGAA GAACAGCAAG CCCGCTTCCG ATGGCAAGCC GACTTCACCG
CAACCGGAAG GCGCCAGCGA GCGCTCGCCG GCCACGGGAA GCACTACCGG CAAAGCCGGT
GCACAATCAT AA
 
Protein sequence
MSNMNQTASS SRSQGGGRRF DVARMLLEGR AFFALIAIIV IFSLLSPVYF STSNFLTMSS 
HVAIFGLLSL GMLLVILTGG IDLSVGSTLG LAGVFAGFLM QGVSFEAFGV VVYPPVWVVV
VLTCGLGALV GAINGVLIAY FKVPAFVATL GLLYVARGVA LLMTDGLTYN NLGGSEALGN
TGFDWLGFNR LFGIPVGVLI LAAVAIACLL LLSRTPFGRW VYSTGGNARA AELSGVPVKR
VQVSVYVLSG ICAAIAGLVL SSQLTSAGPT AGTTYELTAI AGVVIGGAAL TGGRGNVRGT
LLGAFVIGFL SDGLVIIGVS SYWQTVFTGA VIILAVLLNS IQYSGRKNSK PASDGKPTSP
QPEGASERSP ATGSTTGKAG AQS