Gene Csal_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0297 
Symbol 
ID4025953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp335808 
End bp336599 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content58% 
IMG OID637965447 
ProductIclR family transcriptional regulator 
Protein accessionYP_572359 
Protein GI92112431 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID[TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCAC AGACCAATGA CGAACCTCTC AAACCGGACG ATCGCGATTT CGTGACTGCG 
CTGGCCAGCG GTCTGGACGT CATACTCGCC TTTGACCATG CCAACCCGCG CATGACACTC
AGCGAAGTCG CCACCAAGAC CGGCATGAAC CGTGCCCGGG CCCGCCGTTT TTTGCTGACG
CTTAACGCCT TGGGATATGT ACGCAAACAG CATCGACATT TCGAGCTGGC GCCCAAGACA
CTGCAGCTTG GGTATGCGTT TCTCTCGGCA AACAATTACC GCTCAGTGAT CCAACAGCAT
CTAGAGGACA TTACCCAACA GACCGGAGAA TCCTCATCAC TGGGTGTACT CGACGGCAGC
GATGTCACCT ATGTATGCCG CTCTGCGGCA CCGCACCGGC TGATGGTAAT CACTCTGGCG
ATCGGCACTC GCCTACCGGC GGTAGCAACC TCGATGGGAC GAGTACTACT TGCGCAATTG
CCCGAGGACG AACTCGATGC CTTGCTGGAG ACGGTCACCC TTGAGCAGCA CACCGAGCGC
ACCATCACTG ACAAGGCCGA ACTCCGCGCC TGCCTGCGCC AGGTTCGCGA GCAAGGTTAT
TGCATCGTCG ACCAGGAACT CGATTCTGGC CTGCGTTCGC TTGCCTTGCC GGCCTTCGAT
GCTCACGGCA GGTTGCTAGG CGCCATCAAC GTGAGCACCA ACGCCGCACG CATCGACATG
ACGATGCTGA CCGAGCGGTT CCTGCCACTG CTTCGTGAGA AGGCGCAGCA AATCGCCAAT
CAGGTCAACT AA
 
Protein sequence
MNAQTNDEPL KPDDRDFVTA LASGLDVILA FDHANPRMTL SEVATKTGMN RARARRFLLT 
LNALGYVRKQ HRHFELAPKT LQLGYAFLSA NNYRSVIQQH LEDITQQTGE SSSLGVLDGS
DVTYVCRSAA PHRLMVITLA IGTRLPAVAT SMGRVLLAQL PEDELDALLE TVTLEQHTER
TITDKAELRA CLRQVREQGY CIVDQELDSG LRSLALPAFD AHGRLLGAIN VSTNAARIDM
TMLTERFLPL LREKAQQIAN QVN