Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0271 |
Symbol | |
ID | 4026360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 307587 |
End bp | 308600 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965421 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_572333 |
Protein GI | 92112405 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0530138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAGA ACTGGATCGA TCCAAACGCA TCCCGCCGCC CCTTCGCCAA GCGCGCGCTC GGCGCCGTCG CGCTGACGCT CGGCATGACG CTGGCCGGCG GCGCCCAGGC CGTGGACCTG CGCTTCGGCC ATGGCGGCAC CGAGGACACC GCCTATCAGC TTGGGGCCGA ACGCTTCAAG GAACTGGTCG AGGACAAGAC CGACGGCGAT GTCTCCGTCA CCATCCTCGG CAACTCCGTG CTCGGCCACG AAACCGAGAT GTTCGAACAG CAGATGGCCG GCGCGCTGGA CATGTCGATC ATCAATCCCG GCTTGATCAC GGATTTCTCG CAGACCGCCA ACGTGTTCTC GATTCCGTTC ATGTATCGCG ACGAGGCCCA CTGGCGCCAC GTGCTCGATG GCGAGGTCGG GCGCGACATC GCGGACCGCA TCGAGGACGA CACCGGCGTC AAGGTGCTGG CCTTCTTCGG TGGCGGCAAG CGCCAGATCG TCAGCACGCG GCCGCTGGAA AGCCTCGACG ACCTGGAAGG CATGAAGCTG CGCACCAACC CGACCGAGCC GCTGATCGCC GCCTGGAAAG CCCTGGGCAC CGAGCCCACC GTCATGGCCT GGAAAGAGAT CTACACCGGG CTGCAACTGG GCGCCATTGA CGGCCTGCTC AACGAGGCCG AGTGGATTCA TCGCATGCGC TTCCACGAAG TGGCCCCGCA CATCGGGCTC TCCGAGCATG ACATCACCGT GCGCCTGCTG ACCCTCTCGC AAATGACCTG GGATCGTCTC GACGACGCCC AGCGCGAGGC GGTCATGGCT GCCGCCCAGG AAGCCGCGAG CTATGCCCGC AAGGTGCAGC TCGAACAGGA CGCCGAAGCA CTCGAGACAC TCGAGGAGGA AGGCGCCACG CTCTACCCGA TGGATCGCGA GCGCATGAAG GAGATCGTCG CCGAGCCGCT GCAGAAAGTG ATCGACGACA TGGGCCTCAC CGAGCTGCAT GACCGGATCG TCAACGTCGA GTAA
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Protein sequence | MTQNWIDPNA SRRPFAKRAL GAVALTLGMT LAGGAQAVDL RFGHGGTEDT AYQLGAERFK ELVEDKTDGD VSVTILGNSV LGHETEMFEQ QMAGALDMSI INPGLITDFS QTANVFSIPF MYRDEAHWRH VLDGEVGRDI ADRIEDDTGV KVLAFFGGGK RQIVSTRPLE SLDDLEGMKL RTNPTEPLIA AWKALGTEPT VMAWKEIYTG LQLGAIDGLL NEAEWIHRMR FHEVAPHIGL SEHDITVRLL TLSQMTWDRL DDAQREAVMA AAQEAASYAR KVQLEQDAEA LETLEEEGAT LYPMDRERMK EIVAEPLQKV IDDMGLTELH DRIVNVE
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