Gene Csal_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0259 
Symbol 
ID4026348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp295969 
End bp296943 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content58% 
IMG OID637965410 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_572322 
Protein GI92112394 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCTA GCAATTCTGT TGCAACCCAT CCCCCGGCGG TAACGCGCCG GGGCCGCCGA 
CAGGGCACCA AGGTGCGTCG TCAGCGCGTG CGAGCTGCCT GGCTGTTCCT GGTGCCAATG
CTCGTCACCC TGGCAATGGT TGCCGGCTGG CCGCTGTTGC GTACGTTCTA CTTCAGTTTC
ACCGACGCCT CGCTGGCGGA TACGGGGGAA GCCAACTTCA TAGGCTTCGA GAACTATCTG
GGATATTACC AGGGAGCCTG GTACGGCCTG CTGACCGATT CCGCCTGGTG GCAGTCGGTC
TGGAACACGC TGTTCTTTAG TGTCGTGTCA GTGTCGCTGG AGACGGTCTT CGGCATCATC
GTCGCCTTGA TCCTCAATGC CGAGTTCAAG GGACGCATGC TGGTGCGTGC TGCCGTGCTC
ATCCCCTGGG CGATTCCCAC CATCGTGTCG GCCAAGATGT GGGCGTGGAT GCTCAACGAT
CAGTTCGGCA TCATCAACCA TCTGCTGATG TTGCTGGGCC TGATCGATGC CCCCCTGGCC
TGGACTGCCG ACGCCGATCT GTCGATGTGG GCGGTGATCA TCGTCGATGT GTGGAAGACG
ATTCCCTTCG TTGCCCTGCT GGTACTGGCG GCACTGCAAA TGCTGCCTCG GGATTGCTAC
GAAGCCGCCG AGGTCGATGG TATCCACCCG ATCAAGGTGT TTTTCCGGGT GACATTACCC
TTGATCACAC CTGCGTTGCT GGTGGCAGTG ATCTTCCGCC TGCTGGATGC ACTGCGCGTG
TTCGACGTGA TTTACGTACT GACTTCCAAT TCCACCAGCA CCATGACGAT GTCGATATAC
GCACGTCAGC AACTGGTGGA GTTTCAAGAT GTGGGCTATG GCAGTGCTGC CTCGACCTTG
CTGTTTTTGA TCATCGCCTT GGCCACCGTG ATTTATCTCT ATCTGGGGCG TCGTCAGCTG
GGAGGTGATG AATGA
 
Protein sequence
MTASNSVATH PPAVTRRGRR QGTKVRRQRV RAAWLFLVPM LVTLAMVAGW PLLRTFYFSF 
TDASLADTGE ANFIGFENYL GYYQGAWYGL LTDSAWWQSV WNTLFFSVVS VSLETVFGII
VALILNAEFK GRMLVRAAVL IPWAIPTIVS AKMWAWMLND QFGIINHLLM LLGLIDAPLA
WTADADLSMW AVIIVDVWKT IPFVALLVLA ALQMLPRDCY EAAEVDGIHP IKVFFRVTLP
LITPALLVAV IFRLLDALRV FDVIYVLTSN STSTMTMSIY ARQQLVEFQD VGYGSAASTL
LFLIIALATV IYLYLGRRQL GGDE