| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0204 |
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| Symbol | |
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| ID | 4027169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 224469 |
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| End bp | 227078 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637965355 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_572267 |
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| Protein GI | 92112339 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATT CGTTCTTCGA CACCTTCGAT ATCGACTTGT CGTCATCGCA GCGGTTGCTG
ACCCTTGAGG TCGCCGGGAC GGCGCTGCTG CCGCATCGCC TGGTGGGCGA GGACCGCGTC
AGCGCCCCCT TCACCTACAC CCTCGACTGC ATCTCCCAGC GCAGCGACAT CGAGCTCAAG
ACATTGCTGG CCCAGCCGGC CCGGCTTTCG ATCCTGCAGG CCGACGGCAG CTACCGCCCG
CTGCACGGGC TGGTCTCCGA GGCCGCGCTG CTGGGCGAGG ATGGCGGCGT CACCTATTAC
CAGCTCACCC TGGTGCCGTG GCTCAAGATG CTTGAGCTGG GCCGCGACAG CCGCATCTTC
CAGGATCGCA GCGTCGTCGA CGTGCTCACC CAGGTATTCG AGGGGCATGC ACTGGCCAAG
GGCCGCTACC GCTTCGACCT GCGCCGCGAC TACCCCGCGC GCAGCTACTG CGTGCAGTAC
CGCGAGAGTG ACCTGAACTT CATCAGCCGC CTCTGCGAGG AAGAAGGCCT CTTCTACTAC
GCCGAATTCG CGGGCGATGA CGATGACTTC GACGGCCACC GCATCGTCTT TACCGACGAT
GTCGATACCA CCCAGCCCGT CAGCCCCCAG GCGATTCGCT TTCATCGTCA GGATGCCACC
GAGACCGAGG ACGCCCTCAA CCAGTGGGGC GGCGTGCGCA CCCAGCAGCC CACCCGGGTC
AGCGTGGGCA CCTTCGACTA CAAGCAGCCC TCGCTCACCA AGCGCACCGG ACTGGAGACC
CTCAGCGATC AGGGTAACCT GCCGCCGACC GAGGTCTACG ACTACGCCGG CGAGTACTAC
TACCACGGCT TCGAGCGCGG CGAGCGCCTC ACCGAGAACC GCCTCGAGGC CCATGAATCG
CTGGCCAAGC GCTTTCGCGG CAGCGGCGGT GCCCGCCAGC TCCAGGCCGG GCGCTGGTTC
GAGCTCACCC AGCACCCGCT GCACGACCGG GGCGGCGAGG AAGAACGCCA GTTCCTGCTG
CTCGGCGTCA CCGTCCACGC CGAGAACGCG CTGCCGGTCT CGACCCAGCA CCAGGCGCTG
CCCGGCAGCC TGCAGCCGCA GCTCGACGCC GCCAAGCAGG CGCACGGTCT CGAGGGAGAG
ACGGCCGATC CCACCGGCGA GCGGCTATCG GATTACGCCA CCGGCGGCAC CGGCCACTTC
CTGGTCGATC TCGAGGCCCA GCGACGCAGC CAGCCTTATC GCCACCCGCT GACCCATCGC
CGCCCGGTGA TCGGCGGGCC CCAGACCGCC ACCGTGGTCG GCCCCGCCAA CGAGGAGATC
CACACCGACC CCCTCAACCG CGTGCGGGTG CAGTTCCACT GGGATCGCCA GGGCCAGCAT
GACGAGAATT CCAGCGTCTG GCTGCGGGTC TCCCAGCCCA ACGCCGGTGC CGGCTGGGGC
GGCGTGTTCG TGCCGCGCAT CGGCCAGGAA GTCCTCGTCG ACTTCCTCGA GGGCGACGCC
GACCGGCCGC TGATCACCGG CCGGGTCTAC AACGGCGAGC AGAGCCCCGA CTGGCACAGC
CACGGCCTGC TCTCGGGCTT CAAGAGCAAG ACCTATCGCG GCAGCAAGTA CAACGAACTC
GTCTTCGACG ACGCCACCGA CCAGGAGCGC GTTCGTCTCA GTTCCGAAGC CGAGAAGAGC
CAGCTCAACC TCGGCTACCT GATCCACCAG ACCGGCAACA CCCGCGGCGC CTTCCGCGGC
ACCGGGTTCG AGCTGCGCAG CGACGCCTAT GGCGCCATCC GCGCCAACCA GGGGCTCTAT
CTCACCAGCT GGGGCCAGCT CGGCGCCAGC GGTGACCAGC TCGACCTCAC CCCGGCCAAG
CAGCAGCTCG ACAGCGCTTA CCAGCTCAGC GACATGCTGA GTCAAAGCGC CCAGGATCAT
AACGCCGAGG CCCTCGACAG CCGTACACAC CTCAAGCAGG CGGGCGAGGA CGCCGACGAC
CGCTACGGCA ACAGCGAGCA ACTGACCAGC ACCGATCAAA CCAGTGCTAG CGGCGCCACC
GACAGCGGCG GCCGCGGTGA AGCGGCACGC ATGAAAGCCC CCTGGCTGCA CCTGGCCTCA
CCCGCCGGCA TCACGCTGAG CACCCCGGAG TCGACCCACT TGGCCCAGGG CCGGTCGCTG
AGTGTTTCCA GCGGCGAAGA CGTCAACGTG GCCACCGGCA AGAGCCTGGT CGCCTCCATT
TCCGAGACGC TCTCGCTGTT CGTGCAGAAG GCCGGCATCA AGCTGTTCGC GGCACGGGGC
AAGGTGGAGA TGCAGGCGCA GTCGGACAAC CTCGAGGCCA CCGCGCGCCA AAACCTTAAC
GTTACTTCCA CCGACGAGAA GGTCGATCTC TCCGCCGCCG AGGAGATTCT GCTGGTCAGC
GGCGGCGCTT ACGTGCGCAT CAAGGGCGGC AATATCGAGC TGCACGCCCC CGGCAAGGTC
ACCGTCAAGG GGGCGACGCA GGACTTCAGT GGGCCGGCGG AGATGCATGT GGATAAGCCG
GTATTGCCCG AGGCCGATGA CCCCATTTGT GTCAGCTGTT GGCTAAAGGC ACTGAAAGAG
CAGCGAGCGC TGGTCAAGGT GCAGTCATGA
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| Protein sequence | MSDSFFDTFD IDLSSSQRLL TLEVAGTALL PHRLVGEDRV SAPFTYTLDC ISQRSDIELK
TLLAQPARLS ILQADGSYRP LHGLVSEAAL LGEDGGVTYY QLTLVPWLKM LELGRDSRIF
QDRSVVDVLT QVFEGHALAK GRYRFDLRRD YPARSYCVQY RESDLNFISR LCEEEGLFYY
AEFAGDDDDF DGHRIVFTDD VDTTQPVSPQ AIRFHRQDAT ETEDALNQWG GVRTQQPTRV
SVGTFDYKQP SLTKRTGLET LSDQGNLPPT EVYDYAGEYY YHGFERGERL TENRLEAHES
LAKRFRGSGG ARQLQAGRWF ELTQHPLHDR GGEEERQFLL LGVTVHAENA LPVSTQHQAL
PGSLQPQLDA AKQAHGLEGE TADPTGERLS DYATGGTGHF LVDLEAQRRS QPYRHPLTHR
RPVIGGPQTA TVVGPANEEI HTDPLNRVRV QFHWDRQGQH DENSSVWLRV SQPNAGAGWG
GVFVPRIGQE VLVDFLEGDA DRPLITGRVY NGEQSPDWHS HGLLSGFKSK TYRGSKYNEL
VFDDATDQER VRLSSEAEKS QLNLGYLIHQ TGNTRGAFRG TGFELRSDAY GAIRANQGLY
LTSWGQLGAS GDQLDLTPAK QQLDSAYQLS DMLSQSAQDH NAEALDSRTH LKQAGEDADD
RYGNSEQLTS TDQTSASGAT DSGGRGEAAR MKAPWLHLAS PAGITLSTPE STHLAQGRSL
SVSSGEDVNV ATGKSLVASI SETLSLFVQK AGIKLFAARG KVEMQAQSDN LEATARQNLN
VTSTDEKVDL SAAEEILLVS GGAYVRIKGG NIELHAPGKV TVKGATQDFS GPAEMHVDKP
VLPEADDPIC VSCWLKALKE QRALVKVQS
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