Gene Csal_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0162 
Symbol 
ID4026231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp185581 
End bp186489 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID637965313 
ProductLysR family transcriptional regulator 
Protein accessionYP_572225 
Protein GI92112297 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTACATC GCCTGGAATT CCTCGATTTA CAAGCCTTCA TTCTGGTCGC AGAGCTGGGA 
TCCTTTCACG AAGCCGCACA ACGCCTCCAT CTCTCTCAGC CGGCGCTGTC CCGCCGAATT
CAGAAGCTCG AAGAAATCCT GGAAGTCGAG TTGCTGGAAC GCACCACCCG GCGAACGCGG
CTGACCCCCA TCGGCACGGA CTTCCTGCCC CGGGCGAGAC GCATGATCGA GGAGTACGAA
TCGTCGATCC TGGGCATTAG AGAGCTGGCC ACGCATCAGA AGGGCACGGT CACCATTGCC
TGCATCCCCA CCGCGGCGTT CTATTTCCTG CCTAGTGTGA TCCGTGGATT CAGCGAAGCC
TGGCCCGGCA TCCGCATCCG GATACTCGAC GTGAGTGCCA AGGAAGGGCT GGAGAGGGTC
ATCAGCGGCG AGGCCGACTT CGGTATCAAC ATGTTCAGCG CCCAGAGTCC GGAAGTCTCT
TTCACCCCAC TGCTGAAAGA CCCTTTCGTC CTGGCATTGC GTTCGGACCA TCCCCTTGTC
GATAAGCCAA GGATCGAATG GTCGGATCTT GAACAGGTCA GATTGATCAC GGTGAGTCGA
GACAGCGGTA ATCGCATCTT GCTGGACAAC ACCCTGTCGG CGGAAGGCAT TCGATTGAAC
AGCTTCTACG AAGTCCAGCA CCTTTCCACT TCGCTGGGTC TGGTCGAGTC GGGGCTGGGC
GTGGCCATAT TGCCTCGCAT GACCATGCCC GGCGCCGACC ATGACTCGCT GCGCGCACGT
GAACTCCCCA AGCCACGCAT TCAACGCACG ATCGGCCTGG TAAGAAGCAA CTCGCACAGT
ATTTCCAGCA CGGCCCAGCT GTTTATCGAC ATGCTGCTCG AGCGCTGGGG CAACTCCGCC
TGCACCTGA
 
Protein sequence
MLHRLEFLDL QAFILVAELG SFHEAAQRLH LSQPALSRRI QKLEEILEVE LLERTTRRTR 
LTPIGTDFLP RARRMIEEYE SSILGIRELA THQKGTVTIA CIPTAAFYFL PSVIRGFSEA
WPGIRIRILD VSAKEGLERV ISGEADFGIN MFSAQSPEVS FTPLLKDPFV LALRSDHPLV
DKPRIEWSDL EQVRLITVSR DSGNRILLDN TLSAEGIRLN SFYEVQHLST SLGLVESGLG
VAILPRMTMP GADHDSLRAR ELPKPRIQRT IGLVRSNSHS ISSTAQLFID MLLERWGNSA
CT