Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0116 |
Symbol | |
ID | 4027042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 139207 |
End bp | 140268 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965267 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_572179 |
Protein GI | 92112251 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.754255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATTGC AAAACGACCG CCTACTGCGT GCCTTGGCGC GCCAACCGGT AGACCGCACA CCGGTGTGGA TGATGCGCCA AGCGGGCCGT TATCTGCCCG AATATCGGGA GACGCGCGGC CAGGCCGGCA GTTTCATGGA CCTGTGCCGC AACGCCGAAC TGGCGTGCGA GGTCACCATG CAGCCGCTTC GCCGCTATGC GCTCGATGCG GCGATCCTGT TTTCCGACAT CCTCACGATT CCCGACGCCA TGGATCTGGG GCTGTACTTC GAAACGGGCG AAGGCCCCAA GTTTCGCAAG ACGGTGCGCA GCGCCGAGGC TGTGGACGCC TTGCCGGTGC CGGATGCCGA GCGGGATCTC GATTATGTGA TGAACGCGGT GCGCACCATT CGCCACGAAC TGGCGGACAG CGTGCCGTTG ATCGGCTTTT CGGGCAGCCC CTGGACGCTG GCGACCTACA TGATCGAAGG CGGCTCGAGC AAGGACTTCC GGCACGCCAA GGCATTGATG TACGGCGATC CCGCGGCGAT GCACGCGCTG CTCGACAAGC TGGCGCGGTC GGTCACCGAC TACCTCAATG CGCAGATTCG TGCCGGAGCC CAGATCGTGC AGATCTTCGA CACCTGGGGC GGCGTGTTGT CGACGCCGGC CTACCGCGAG TTCTCGCTGG CCTACATGGC GCGCATCGTC GAAGGACTGA TCCGGGAGCA CGAGGGGCGC CACGTGCCGG TGATCCTGTT CACCAAGCAG GGCGGCCAGT GGCTGGAGAC CATCGCCGAC AGCGGCGCCG ATGCCGTGGG CCTGGACTGG ACCACCGAGC TGAGCGACGC CCGGGCCCGT GTCGGGGATC GCGTGGCGCT GCAGGGCAAT CTCGATCCCA ATGTGCTCTT CGCCTCGCCC CAGGCGATTC GCGATGAGGT GGCGCGCATT CTGGCCAGCT ATGGCAGCGG TCCCGGCCAT GTCTTCAACC TGGGGCATGG TGTCAGCCAA TTCACTGATC CCGATCATGT CGCCGCCTTC ATCGAGGCAC TGCATGAACT CAGCCCGCGT TATCATGGCT GA
|
Protein sequence | MPLQNDRLLR ALARQPVDRT PVWMMRQAGR YLPEYRETRG QAGSFMDLCR NAELACEVTM QPLRRYALDA AILFSDILTI PDAMDLGLYF ETGEGPKFRK TVRSAEAVDA LPVPDAERDL DYVMNAVRTI RHELADSVPL IGFSGSPWTL ATYMIEGGSS KDFRHAKALM YGDPAAMHAL LDKLARSVTD YLNAQIRAGA QIVQIFDTWG GVLSTPAYRE FSLAYMARIV EGLIREHEGR HVPVILFTKQ GGQWLETIAD SGADAVGLDW TTELSDARAR VGDRVALQGN LDPNVLFASP QAIRDEVARI LASYGSGPGH VFNLGHGVSQ FTDPDHVAAF IEALHELSPR YHG
|
| |