Gene Csal_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0088 
Symbol 
ID4026010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp111183 
End bp112127 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content64% 
IMG OID637965239 
Producthypothetical protein 
Protein accessionYP_572151 
Protein GI92112223 
COG category[R] General function prediction only 
COG ID[COG1054] Predicted sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000143801 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATT CGCACGACAC GCCGCCCATC GTGGTGGCGG CGCTCTATCA GTTCGTCACC 
CTCGACGATT ACGAAGCCCT GCGCGAGCCC CTGCTCGAGA CGATGCGCGC CCACGACGTG
AAAGGCACCC TGCTGCTGGC CAATGAAGGC ATCAACGGCA CCGTTTCCGG CACGCGCGAG
AGCATCGACG CGCTGCTCGC CTGGCTGCGC GCCGACCCGC GCCTGGCCGC GGTCGACCAC
AAGGAATCCT ACTGCGACGC GCATCCTTTC TATCGCACCA AGGTCAAGCT CAAGCGCGAG
ATCGTCACCC TCGGCGTCGA CGGGGTGGAT CCCAACCAGA AAGTCGGCAC CTATGTCGAA
CCCGAGGACT GGAACGACGT CATCGCCGAT CCGGAGGTCC TGGTCATCGA TACGCGCAAC
GATTACGAAG TGGAAATCGG CTCGTTCGAG GGCGCCATCG ACCCACAAAC CAAGACGTTC
CGCGAGTTTC CCGACTACGT GAAGGCGCAC TACGACCCCG CCAAGCACAA GAAGGTGGCG
ATGTTCTGCA CCGGCGGGAT TCGCTGCGAG AAAGCTTCCA GTTTCATGCT GAATGCAGGC
TTCGAGGAGG TGTATCACCT CAAGGGCGGC ATTCTGAACT ATCTGGAGAA GGTGCCCGAG
TCGCAGTCGC GCTGGCAAGG CGAATGCTTC GTGTTCGACA ACCGCGTGAC CGTGCGCCAC
GATCTCGCCG AAGGCGAATA CGACCAATGC CACGCCTGTC GCCGGCCGAT CTCCGAGGCC
GACATGGCCT CCGAGAAATA CGAGCCCGGC GTGAGCTGCC CGCATTGCTG GGACAGCCTG
CCGGAGAAGA CGCGCGCCAG TGCCCGCGAA CGCCAGCGTC AGATCGAGCT CGCCAAGCAG
CGCGGCGAAC CGCACCCGCT GGGGCGCGAC CCGCGCCAGA TATGA
 
Protein sequence
MTDSHDTPPI VVAALYQFVT LDDYEALREP LLETMRAHDV KGTLLLANEG INGTVSGTRE 
SIDALLAWLR ADPRLAAVDH KESYCDAHPF YRTKVKLKRE IVTLGVDGVD PNQKVGTYVE
PEDWNDVIAD PEVLVIDTRN DYEVEIGSFE GAIDPQTKTF REFPDYVKAH YDPAKHKKVA
MFCTGGIRCE KASSFMLNAG FEEVYHLKGG ILNYLEKVPE SQSRWQGECF VFDNRVTVRH
DLAEGEYDQC HACRRPISEA DMASEKYEPG VSCPHCWDSL PEKTRASARE RQRQIELAKQ
RGEPHPLGRD PRQI