Gene Csal_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0013 
Symbol 
ID4027332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp16071 
End bp17240 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content68% 
IMG OID637965165 
Productglycosyl transferase, group 1 
Protein accessionYP_572077 
Protein GI92112149 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.636661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCGAC CATTGTCCGA GGAGCTTGCC TTGCAGCACA AGGTCTTGCA CATCTGTTTA 
TCCCGCGGCT GGGGCGGGCT GGAAATGTAC CCCGTGCGCA TTATACCCGA GCTGGTGCGC
CAGGGGTGGC GTGCCTACGT GCTGACGCTC GAAGGCACGC GCCTGGCCCA GGCGCTGGCC
GACAGCAAAG CGGTCGAGGT GCGCAGTGTG CGCTCACCCT CGCGAGCATT GTGGCAATTG
CCGGCACTGG TGCGCTGGTT GCGCCGGCGC GGCATCGGGG TCGTGCACTG CCACAAGTCG
AGCGATCTGC GCCTGGGCGC GCTGCTCAAA TGCCTGTGCC CCGAATTGCG CCTGATCTTC
ACCGATCACA TGGGGGTGAC GCGTCCCAAG CACGACCCTT ACCACCGCTG GGTGTATCGC
CGCGTCAACC GCGTACTGTC GATCAGCGAG GCGACGCTGG CGCGCAACCG TAAGGCCTTT
CCGCTGCCGG CGTCACGTAT CACGCCGCTT TATCTGGGAG TCGACACGGC ACGGTTCACG
CCGCGTCTCG AGGCAGCCGA ACGCCAGACG CTGCGCGATG ATCTGGGCAT TCCGCGCGAG
GCGGTGGCGA TCGCCTTGCC GGGGCGTCTG ACGCCGGGCA AGGGACAGCA GGTCCTGCTG
GATGCCTTCA TGCGGCTGGT CGACGCAGGC GACCGTCAGT CACACCTGGT GCTGATCGGC
GGGCTGGAAG CGGGCGAGGG CGGCAACTCC ACCTTCATCG CCTCCCTGCG TCAGCAGGTC
ACCGAGCGAG GCCTGCAGGA CCGTGTCACC TTCACGGGCT TTCGGCGCGA CCTGGCGCGG
CTGTTCGAAG TGCTCGACAT CGTCTGCGTG CCGTCACGCA ACGAAGCCTT CGGCCTGACG
GTGATCGAGG CGATGGCAGC GGGCAAGGCC GTGGTGGGGT CCGACAGCGG CGCGATCCCC
GAGCTCATCG GAGCCGGCTG CGGACGCCTG GTCGACCCGC AGGACCCGGC GGCCTGGGCC
GCGACACTCC GCGAGCTGCG CGATGCCCCG GCGCTGCGTG AGCAACTGGG AACGGCCGCG
CGTCGGCTGG CCAACGCGCG CTTCACGCTG GCCAAGCACG TCACCGGGCT GCGGGCGGTT
TACGAAGACA TCGATCAGCC CTGGCGATAG
 
Protein sequence
MSRPLSEELA LQHKVLHICL SRGWGGLEMY PVRIIPELVR QGWRAYVLTL EGTRLAQALA 
DSKAVEVRSV RSPSRALWQL PALVRWLRRR GIGVVHCHKS SDLRLGALLK CLCPELRLIF
TDHMGVTRPK HDPYHRWVYR RVNRVLSISE ATLARNRKAF PLPASRITPL YLGVDTARFT
PRLEAAERQT LRDDLGIPRE AVAIALPGRL TPGKGQQVLL DAFMRLVDAG DRQSHLVLIG
GLEAGEGGNS TFIASLRQQV TERGLQDRVT FTGFRRDLAR LFEVLDIVCV PSRNEAFGLT
VIEAMAAGKA VVGSDSGAIP ELIGAGCGRL VDPQDPAAWA ATLRELRDAP ALREQLGTAA
RRLANARFTL AKHVTGLRAV YEDIDQPWR