Gene Csal_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0002 
Symbol 
ID4027321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1630 
End bp2733 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID637965154 
ProductDNA polymerase III subunit beta 
Protein accessionYP_572066 
Protein GI92112138 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.186277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTTA CCATCACCCG CGAAGCCCTA TTGCGCCCGC TATCGCTGGT CGCTGGCGTC 
GTCGAGCGTC GTCAGACCCT GCCGGTGCTG TCCAACGTGC TGCTCCAGGT GCAGGATTCG
CAGCTGGCAT TGACCGGTAC GGATCTCGAG GTCGAGTTGA TCGGCCGCAC CACGCCGCAT
CACGTCGATG AACCGGGCTC TGCCACGGTA CCGGCGCGCA AGCTGATGGA CATTTGCAAG
TCGCTGCCCG AGCAGACCGA CATCACCTTC ACGCTCGAGG AAGGACGGGC GATCCTGCGT
GCCGGGCGTT CGCGTTTCAC CTTGTCCACG CTGCCCGTGG CGGAGTTCCC GAATATCGAG
GGAAGTCAAA GCGATACCAC GCTGACACTG GCGCGTGGCA CGCTCAAGCA TCTGATCGAT
GCGACGTCCT TCGCCATGGC GCAGCAGGAT GTCCGCTACT ACCTGAACGG CATGCTGCTC
GAGTTCGGCC ACCATCTGGT GCGTACGGTC GCCACCGACG GCCACCGCCT GGCGGTCTGC
GCGCGCAGCG CGGACGTCGA GGTCGAGCCG TCGCAAAAGC TGATCGTGCC TCGCAAGGGG
ATTCTCGAGC TGGCGCGCCT GCTGGACGGC AGCGACGAGC CGGTGGAACT CACCATCGGC
GGTACGCACC TGCGCGCCCA GACCGGTGAT TTCACCTTCA CCTCGAAGCT GGTCGACGGC
AAGTTCCCGG ATTACGATCG CGTCATTCCG CGTGGGGGCG ACAAGGTCGT CATCGCCGAG
CGTGGCGAGC TGCGCCAGGT GCTGTCGCGC ACCGCGATTC TCTCCAACGA GAAATATCGC
GGAGTGCGAC TCAACCTCGA GGAGAACAAC CTGCGGGTGA CGGCGAACAA CCCCGAGCAG
GAGGAGGCCG AGGAGAACGT GGCCATCGAG TACGATGGGG GCGCGCTGGA AGTCGGTTTC
AACGTGGGGT ACCTCGTCGA TGTGCTCGGC GTGCTGGACG CCGATCGTGT GCAGATGACG
CTTTCCGATC CCAACAGCAG TGCACTGCTG GAGGAACCGG GCGGCGGCGA TGCCATGTAC
GTGGTCATGC CGATGCGCCT CTGA
 
Protein sequence
MRFTITREAL LRPLSLVAGV VERRQTLPVL SNVLLQVQDS QLALTGTDLE VELIGRTTPH 
HVDEPGSATV PARKLMDICK SLPEQTDITF TLEEGRAILR AGRSRFTLST LPVAEFPNIE
GSQSDTTLTL ARGTLKHLID ATSFAMAQQD VRYYLNGMLL EFGHHLVRTV ATDGHRLAVC
ARSADVEVEP SQKLIVPRKG ILELARLLDG SDEPVELTIG GTHLRAQTGD FTFTSKLVDG
KFPDYDRVIP RGGDKVVIAE RGELRQVLSR TAILSNEKYR GVRLNLEENN LRVTANNPEQ
EEAEENVAIE YDGGALEVGF NVGYLVDVLG VLDADRVQMT LSDPNSSALL EEPGGGDAMY
VVMPMRL