Gene Cpin_7297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7297 
Symbol 
ID8363491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9121556 
End bp9122521 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content46% 
IMG OID644969430 
ProductABC transporter related 
Protein accessionYP_003126897 
Protein GI256426244 
COG category[R] General function prediction only 
COG ID[COG4152] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA TAGAGATAAA ACACCTGTAT AAGCACTATG CCACCCATAA GGCTGTAGAT 
GATATCAGCT TTGCTATTCC CAAAGGAAGC ATATTCGGAT TACTGGGCCC CAACGGCGCT
GGTAAGACTA CGCTGCTGCG TATGATCACT GGTATTTTTT ATCCGGATAA GGGGGAGATA
CTTTTTAACG GGCGTCCGTT CGATCCACAG ACGGATATTC ATGCTATTGG CTATATGCCG
GAAGAGAGGG GATTATACAA GAAAATGAAG GTGGGTGAAC AGGCCCTTTA CCTGGCGCAG
CTGAAAGGCA TGTCAGAGCG GGATGCGAAA GACAAGATCA AATATTGGTT TGATAAGTTT
GAGATCAACA GCTGGTACAA CAAGAAGGTA GAAGAACTGA GTAAGGGGAT GCAGCAGAAG
GTGCAGTTTA TTTCTACGAT CATGCATAGT CCGGACCTGC TCATACTGGA TGAACCCTTT
TCTGGTCTGG ACCCGATTAA TGCAAATCTT ATCAAGCAGG AAATATTTGA CCTTAGTAAG
AATGGAACGA CGATCATCTT TTCTACGCAC AGAATGGAGC AGGTAGAAGA GATCTGCGAT
CGTATCGTAC TGGTCAACCA GGGGAAGAAA TTGCTGGATG GAGAGGTAAA ACAGATCAAA
CAGGACTTTA AACAACATCT GTTCCGTATT GGTTTTGGTG TGATGCCAAA CTTCGCGCAG
GTCGCTACAC ATCACTTTTC CATTATCAAA CAGGAGCCGC TTGCTTATAC GGTGAAACTC
ACGGAGGGCA GCACAAACAA TGATATCCTG GCACATTTCA TCCGTCATAA TGTGCCGATC
ACTTCCTTCC AGGAGATACT GCCTTCTATC AACGAGGTCT TCATTCAACA GGTGACCTCC
ATGACCGGTG AGCCGCCTCA GGCTGCCAAT GTTGATGACA GTCAGCCGGC GTATTCCAGC
AACTGA
 
Protein sequence
MNLIEIKHLY KHYATHKAVD DISFAIPKGS IFGLLGPNGA GKTTLLRMIT GIFYPDKGEI 
LFNGRPFDPQ TDIHAIGYMP EERGLYKKMK VGEQALYLAQ LKGMSERDAK DKIKYWFDKF
EINSWYNKKV EELSKGMQQK VQFISTIMHS PDLLILDEPF SGLDPINANL IKQEIFDLSK
NGTTIIFSTH RMEQVEEICD RIVLVNQGKK LLDGEVKQIK QDFKQHLFRI GFGVMPNFAQ
VATHHFSIIK QEPLAYTVKL TEGSTNNDIL AHFIRHNVPI TSFQEILPSI NEVFIQQVTS
MTGEPPQAAN VDDSQPAYSS N