Gene Cpin_7263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7263 
Symbol 
ID8363457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp9079080 
End bp9079982 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content49% 
IMG OID644969397 
ProductUbiA prenyltransferase 
Protein accessionYP_003126864 
Protein GI256426211 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000688363 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTATA TTATAGGCAA GTTATTAGGA TATTTACGTT TAATGCGACC CGCCAATATA 
GTAACTGCAG TAGCAGATAT ACTGGCTGGC GTAGCTATTT CCGGATTTCT GGGTTCTGAA
GTATCCAGTT ATCTGGATCA TTTGTTACCA GTAGTATGTA TGTGCCTGGC AACAATCGGA
TTGTACGGCG GTGGCGTAGT CTTCAATGAT GTGATGGATG CAGAACTGGA TAAGGTGGAG
CGCCCTGAGC GCCCTATTCC GAGTGGCGTG ATCTCCATGA CACAAGCCAT TGTACTGGGT
AGTTACCTGT TACTGGTAGG TGTACTGGCT GCTTTTACAG TAGGCCGTAT CACCGGTTAC
CTGGCACTGG GTATTGCCGT GTGTGCGCTG GTATATGATA AATGGGGTAA ACACCAGGCA
TGGGGCCCGA TCAATATGGG ACTGTGCCGT GGATTGAACC TGCTGATGGG TATCAGTATG
GTTGTGCCTG CCTTAAATAA GTATTGGTGG ATTGGCCTGA TCCCTGTATT ATACATCGCT
GCGGTGACCG CTATTAGTCG TGGAGAGGTG CATGGTGGAA ATACCCGTAC CCTGCGCATT
ACAGCCTTCT GTTATGCCCT GGTATATGGT ACCATGCTGG CGCTGGCCGC AATGAACGGA
CATATTGTGA TTGCGATACC ATTTATCCTG TTGTTTGCAG TCATGATCAA TCTGCCATTA
TTCAATGCCA TTAAAGACCC ATCCGGTCCT AACATAGGAA AGGCTGTAAA GGGAGGTATC
ATAGCGCTGG TCGCCATGAA TGCCGCCTGG GTAGCCGCAT TCTCCACGCT GCCTCACGCA
TTGCTCGTAC TGATCCTTCT GCCATTGTCA TTACTGATGG CGAGAGCGTT TGCAGTGACC
TGA
 
Protein sequence
MNYIIGKLLG YLRLMRPANI VTAVADILAG VAISGFLGSE VSSYLDHLLP VVCMCLATIG 
LYGGGVVFND VMDAELDKVE RPERPIPSGV ISMTQAIVLG SYLLLVGVLA AFTVGRITGY
LALGIAVCAL VYDKWGKHQA WGPINMGLCR GLNLLMGISM VVPALNKYWW IGLIPVLYIA
AVTAISRGEV HGGNTRTLRI TAFCYALVYG TMLALAAMNG HIVIAIPFIL LFAVMINLPL
FNAIKDPSGP NIGKAVKGGI IALVAMNAAW VAAFSTLPHA LLVLILLPLS LLMARAFAVT