| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_7238 |
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| Symbol | |
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| ID | 8363432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 9045142 |
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| End bp | 9046494 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644969372 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003126839 |
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| Protein GI | 256426186 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.866766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGACTA AATATCGTCA GTATTATAAA GACAATTTCC AACTGGCCTA CCCGGTCGTG
ATCTCCCAGC TGGGACATAC CATGGTGGCT TTCTCTGATA CCATCGTCAT CGGGCATACC
GGTGATGTAC CGCTGGCTGC CGTTGCATTG GGCAGCAGCC TCTTTTCTAT TTTTATGGTG
ATAGGCATTG GTATGTCCTA TGGTCTTACG CCATTGATCG CACAGGAAAA CGGACGGAAA
AACCTGTCCC GTTGCGGCTA TCTGCTGCGT CATAGTCTGG CAATCAACAT CCTGCTGGGT
ATTTTATTAT CCACCGTTAT TATCATCGGT AGTAATCACC TGGATCTGCT CGGACAGGAA
GAACGGGTAC GTGTGCTGGC TAAACCTTTC CTGCAATTAC TAGGCTTTTC ATTCTTCCCG
CTGATGATCT TCCTGACCTT TAAACAGTTT GCCGAAGGAC TGGGATTCAC CCGGCAAGCC
ATGAACATCA GTATCATCGG TAACGTATTG AATATCGTAC TGGGTATCAT CCTGGTATAT
GGCCTGTTTG GCGCACCTAA AATGGGCGTA GTGGGGGTGG GGATTGCGAC CCTGACTGAT
CGCACATTAA TGGGGGTGGC AATGGCCTGG TATGTATTGC GTTCTCCGCG TTTTAAGCCT
TATCTGCAGG AATTCAGACA ACGTTACCTG TCCGGCGCAG CATTGAAACA ATTACTGGGT
ATCGGTACAC CGGTAGCTTT ACAATATGTT TTTGAAATCA GCGCATTCAG CGGCGCAATT
GTTATGGCAG GCTGGATCGG CGCCCGTGAA CAGGCTGCTC ATCAGATAGC CATTAACCTG
GCATCAATTA CCTATATGAT GGCAAGCGGG ATCTCTGCTG CTGCCGGTAT AAAAAGTGGT
AATCACTTTG GTGCCGAACA ATGGCGGGAC TTACGTTCTT CCGCCATTGC CAGTTATCAT
ATGGTGCTTG TGATGATGGG CACTACCGCC CTGATTTTCA TGCTGGGATG CCGCCTGCTG
CCCCTGATGT ATATCAGTGA TCCGCAGGTA GTGGATATCG CAGCACACCT GTTGATTATC
GCGGCTTTCT TCCAGCTGTT TGACGGAACA CAGGTGGTAG GACTGGGTAT CTTACGCGGA
CTGGGAGATG TACGGGTACC GACTGTAATC ACCTTACTTG CCTACTGGGG CCTGGGATTG
CCTATTGGTT ATCTATTCGG TATTCACCTG AATTTTGGGA TACAGGGCAT CTGGTGGGGA
CTGCTGATCG GATTGCTGAC CGCATCGATC CTGCTGTTCT TCCGCTTCCA GCATAAGACA
AAAGCCGTAC TGGCGGGCGC ATTGGTAAAA TGA
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| Protein sequence | MWTKYRQYYK DNFQLAYPVV ISQLGHTMVA FSDTIVIGHT GDVPLAAVAL GSSLFSIFMV
IGIGMSYGLT PLIAQENGRK NLSRCGYLLR HSLAINILLG ILLSTVIIIG SNHLDLLGQE
ERVRVLAKPF LQLLGFSFFP LMIFLTFKQF AEGLGFTRQA MNISIIGNVL NIVLGIILVY
GLFGAPKMGV VGVGIATLTD RTLMGVAMAW YVLRSPRFKP YLQEFRQRYL SGAALKQLLG
IGTPVALQYV FEISAFSGAI VMAGWIGARE QAAHQIAINL ASITYMMASG ISAAAGIKSG
NHFGAEQWRD LRSSAIASYH MVLVMMGTTA LIFMLGCRLL PLMYISDPQV VDIAAHLLII
AAFFQLFDGT QVVGLGILRG LGDVRVPTVI TLLAYWGLGL PIGYLFGIHL NFGIQGIWWG
LLIGLLTASI LLFFRFQHKT KAVLAGALVK
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