Gene Cpin_7189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7189 
Symbol 
ID8363383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8981156 
End bp8981935 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content46% 
IMG OID644969323 
Producthypothetical protein 
Protein accessionYP_003126790 
Protein GI256426137 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT TCAACTCCAG CGTGGGCAAG TGGATCAGAG CACTATTCTT TTCAGCTGTC 
ATTATTAGTG CCCCATTAGT AATGCAGGCA CAAAAAACAC CTAAAGTAAA AAACATCATT
CTCGTACACG GCGCTTTCGC AGATGGCTCC GGATGGGAAG GCGTATACAA AATCCTGGCG
GCAAAAGGTT ACAACGTGAC CGCATTACAA TACCCGATGA CATCTCTCGA TGATGATATC
ACCGCCCTGA ACCGTGCAAT AGATAAACAG GATGGTCCAA CCGTACTGGT AGGACACTCC
TATGGAGGTA CAATCATTAC CGGTGCAGGT GCAGATCCCA AAGTATCCAG CCTGGTTTAT
GTAGCTGCAT TCGAGCCGGA TTCTCTTGAA TCTACCTTTC AGCTGGTACA GACAAGACCA
GTTCTGCCGG AAAATGGTAT TCTGCCTCCG GATGACAAAG GCTTCATCTA TTATGACAAA
GCTAAATTCC ACCCTGGATT CTGTGCAGAC GTACCTAAAG AAAAAGCAGA ATTCATGTAC
GCCTCTCATG GCGCAATTGC GCTGTCCTGC TTCGTTACGC CAGTGAAACA TGCACCATGG
AAATACAAAC CAGCTTACGC CATCCTCACC ACTGATGACA AAAGCATCAA CCCTGAGTTA
CAGCAGGATA TGGTAAAACG TTCCGGTGCA AAAGTGACTA CGATAAAAGC AAGCCATGTG
GTGTTTATTT CACATCCGAA AGAAGTAGCA GCAGTAATTG AAGAAGCAGC GAATAGATAA
 
Protein sequence
MNNFNSSVGK WIRALFFSAV IISAPLVMQA QKTPKVKNII LVHGAFADGS GWEGVYKILA 
AKGYNVTALQ YPMTSLDDDI TALNRAIDKQ DGPTVLVGHS YGGTIITGAG ADPKVSSLVY
VAAFEPDSLE STFQLVQTRP VLPENGILPP DDKGFIYYDK AKFHPGFCAD VPKEKAEFMY
ASHGAIALSC FVTPVKHAPW KYKPAYAILT TDDKSINPEL QQDMVKRSGA KVTTIKASHV
VFISHPKEVA AVIEEAANR