Gene Cpin_7146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7146 
Symbol 
ID8363340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8933099 
End bp8933509 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID644969281 
Productprotein of unknown function DUF1348 
Protein accessionYP_003126748 
Protein GI256426095 
COG category[S] Function unknown 
COG ID[COG3558] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA GATATCCATT GCCGCCGTTT ACATTGGAGA CGGCGAAGGA GAAAGTACAG 
CTTGCTGAAG ACGCCTGGAA CTCACAGGAT CCGGAAAGGG TTTCACTGGC CTATAGTGTG
GATACAGAAT GGAGGAACAG GTCAACTTTT CTGAATGGAC GTGAGGCGGC TAAAGCATTT
CTTGCGGATA AATGGAAGAA AGAGCTGGAT TATAAACTGA AGAAAGAACT GTGGGCATTC
ACAGATAACA GGATCGCTGT ACGTTTTGAG TATGAGTATC ATGATAAGAA TGGACAGTGG
TTCAGGGCAT ATGGTAATGA GAACTGGGAG TTTGACGAAA ATGGACTGAT GCAGCGCAGG
TTTGCCAGTA TCAATGATCT GCCGATTGAG GAGTCAGAAA GGAGACTATA A
 
Protein sequence
MEKRYPLPPF TLETAKEKVQ LAEDAWNSQD PERVSLAYSV DTEWRNRSTF LNGREAAKAF 
LADKWKKELD YKLKKELWAF TDNRIAVRFE YEYHDKNGQW FRAYGNENWE FDENGLMQRR
FASINDLPIE ESERRL