Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7108 |
Symbol | |
ID | 8363300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8895891 |
End bp | 8897465 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644969241 |
Product | protein of unknown function DUF1501 |
Protein accession | YP_003126710 |
Protein GI | 256426057 |
COG category | [S] Function unknown |
COG ID | [COG4102] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA GAGACTTTCT TAAATATACC GCTCCGGCAA CGATCCTGCC GACCTTTATA AATGGCTTTG CCGTAAAGGC GTTTGCCGGC TCTTCGCTGC TGAACGCTTT GCAGAAGTCC GCCGAAGATA ATGACCACGT GTTAGTGATG ATCCAGATGA TCGGTGGTAA TGATGGTCTG AATATGATCG TGCCGCTGGA TGTTTATGCA GACTATCAGG CAGCACGTAC CAACATCGCT ATCAAAGAAG GTGAAGTATT GCCGCTGGCA AACAATATAA AAACCGGTTT TCACCCTGCA ATGACCGGTC TGCAGGAACT GTATGAGAAT GGTAAAGTGT GTGTGGTACA GAGCGTTGGT TATCCTTCTC CGGATTATTC CCACTTCCGC GCAATGGACA TCTGGCTGAG TGGTTCAGAT CAGAATCAGA TCATCGAAAC AGGATGGGCC GGCCGTTACC TGGAAACACA ATACCCGGGC TTCCCTGATT CTTATGAAGG TTCAGATCCG CTTGCGATCC AGATCGGTTC GCTGACTTCC CCGGTATTCC AGGGCGCTGA TGCGAACATG GCGGTTGCCA TCTCCAGTTC TTCTGAATTC TATAGCCTGA TTGAAGATGT TTATGACCCT GTTCCTGACA CCCATGCGGG CGTGGAACTG GAATATGTAC GGCTGATCGC TAAACAATCC AACAAATTTG CTGATTCTAT CAAGAAGGCT GCTGCGAATG TCACTTCCCA GAGTCCTTAC CCTGATAACA GGCTGGCAGA ACAGCTTAAA ATAGTTGCCC GACTGGTGGC AGGTGGTCTG AAAACCCGTG TGTATATGGT AACGCATGCC TTCTTCGATA CGCATGCCAA CCAGGTACAG GCTGGTGATA CCGGCAAAGG TGAACACGCA AGACTGTTAG GTCAGCTGTC TGATTCCATT AAGGCATTTA TGGATGACCT GACTAAACTG AAAGCTTCCC GTCGTGTAGT GGGGATGACT TTCTCTGAGT TTGGACGCCG TATCAAATCA AATGGTAGTA TGGGTACTGA CCACGGCGCC GCTGCTCCGA TGATTATCTT TGGTGACTAT GTATTACAGG GTGTACTGGG TTCTTCTCCT GATATTCCTA CACAAACCAA CGTAAGTGAT AATATGCCTA TGCAGTACGA TTTCCGCTCT GTATATGCAT CCCTGCTGGA ACAATGGTTC TGTGTGGATA ATATGACTCT GCAGACAGTC CTGTTCAAAG ACTACCAGCG TCTGCCGATT GTAAGTGGTA TCGCCTGTGG TACGCTGACG ACGATCGACG ATGTGAATAA CGGTAGTAAC AACCTGATTA CCAACTATCC GAATCCGTTC GTTACCACTA CTACCCTGAA GTATAAAACC AGGGGCGGAC AAACAATCGT CCAGATCTTT GATACCATGG GTCGACTGGT ATCCACACCG GTGAATAAGG TACAGGCAGC CGGTGAGTAC AGCATCACTT TTGATAGCGG TAAACTGGCG GCAGGTATTT TCTACGCCCG TATACAAAAC GGTGTGTATC AGAACGTAAG ATCTATGCTG AAGGTGAAAT ATTAA
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Protein sequence | MKRRDFLKYT APATILPTFI NGFAVKAFAG SSLLNALQKS AEDNDHVLVM IQMIGGNDGL NMIVPLDVYA DYQAARTNIA IKEGEVLPLA NNIKTGFHPA MTGLQELYEN GKVCVVQSVG YPSPDYSHFR AMDIWLSGSD QNQIIETGWA GRYLETQYPG FPDSYEGSDP LAIQIGSLTS PVFQGADANM AVAISSSSEF YSLIEDVYDP VPDTHAGVEL EYVRLIAKQS NKFADSIKKA AANVTSQSPY PDNRLAEQLK IVARLVAGGL KTRVYMVTHA FFDTHANQVQ AGDTGKGEHA RLLGQLSDSI KAFMDDLTKL KASRRVVGMT FSEFGRRIKS NGSMGTDHGA AAPMIIFGDY VLQGVLGSSP DIPTQTNVSD NMPMQYDFRS VYASLLEQWF CVDNMTLQTV LFKDYQRLPI VSGIACGTLT TIDDVNNGSN NLITNYPNPF VTTTTLKYKT RGGQTIVQIF DTMGRLVSTP VNKVQAAGEY SITFDSGKLA AGIFYARIQN GVYQNVRSML KVKY
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