Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_7102 |
Symbol | |
ID | 8363294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8887510 |
End bp | 8889642 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644969235 |
Product | elongation factor G |
Protein accession | YP_003126704 |
Protein GI | 256426051 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCT ATGATGAGAA GCACATCAGG AACATTGTAT TATTGGGCGC CGCCAAGAGC GGAAAGACGA CCCTTTGTGA AACCATGCTG TTTGAAGCTG GTATTATTTC CCGACGCGGT ACAGTAGAAG AAGGAAACAC TGTTTCCGAC TATCATGATG TAGAGCATGA AAGGGGAAGT TCTGTCTATG CTACCTGCCT TCACACGGAA TGGCGTGATT ATAAGATTAA TATTATCGAC ACACCCGGAC TGGAAGATTT CATCGGTGAG ATCATTTCTT CCATCAGGGT CTGTGACACG GCTTTACTGC TCCTGAATGC GCAGCATGGA GTGGAAGTGG GGACTGAGCA GATCTGGGAT TATGTGGATA AATACCAGAA GCCGACTATT CTGGCGGTCA ATCAGCTGGA TACGGAGCAG GCCAACTTCT CCCGTACAGT AGAAGAAGCC CGTCGTGTAT TCGGATCGGC AGTGACGGTG ATGCAGTATC CTGTCGACCA GGGACCAGGG TTTAACAGTG TCATCGACCT CTTAAAAATG ACGATGTACC GGTTCCCGGA AAACGGTGGT AAGCCGGAGA AACTGCCTAT CCCTGACAGT GAGAAAGAAC AGGCGGAGCG GCTGCACAAT GAGCTGGTAG AGAAAGCAGC AGAAAATGAT GATACGCTGA TGGAGCAGTA TTTTGAAAAG GGCAGTCTGG ATGAAGATGA AATGCGGCAG GGATTGAAGA TCGGTATGCT GAAACACCAT GTGTTCCCGG TATTCTGTTT GTCCGCCTTA CATAATATGG GCAGCGGACG CCTGATGGGA TTCATCGATA ATGTCGCTCC GGCTGCCATA GACATGCCTG CAGAGCAGGC GGAAGACGGT AGCCCTATTC CATGTGATCC TTCAGCATCC CCCGTATTGT TTGTGTTTAA AACCCTCCAG GAGCCCCATA TAGGGCGCCT TTCGTTTTTT AAGGTACTGG CAGGCGAAAT TAAAGCAGGT GTCGAATTAT ACAGCGAAAA GGGCAATACC GTCGAACGAC TCAATCAGCT GTTTATTACA GATGGCCGTA ACCGTCATCC GGCGGAGGTA TTACGTGCCG GAGATATCGG CTGTACGCTG AAACTGAAAA ATACCCTCAC CAACCATACA CTGTTAGCAG ATAAACAATC CGGTAAACAA GTGAAACCGA TCGGGTTCCC GACCCCTAAA GTCAGGGTAG CTATTGAAGC GACGAATAAA GCGGATGACG AGAAACTGAG TGAAGTCCTG GCGGAGTTGC ATATGGAAGA TCCCACACTG GAAATAGAAT ACAACCGTGA ACTGAAACAG GTGATCCTGC ATGGTCAGGG CGATCTGCAT CTTGCATTGA CCAAATGGCG TTTGCTGAAT ATCTACAAAA TGCATGTGGA ATTCCTGCCG GCGAAGATCC CTTACCGGGA AACGATCCGT AAACATGCTG CGGCTACTTA CCGTCATAAG AAGCAGTCTG GCGGCGCCGG TCAGTTTGGA GAGGTATTTA TCACCATTGA GCCCTATTAC GACGGGATGC CTCCCTATAG GGAACATCCG GTGAGAGAGA CCGAAGAAAT TGCCTTGAAC TGGGGCGGTA AACTGGTGTT CAACAATTGT ATCGTAGGCG GTGCGATAGA AGCCCGTTTC CTGCCTTCCA TCCTGAAAGG TGTGATGGAG AAAATGCAGG AAGGTCCGCT GACGGGTTCC TATGTACGCG ATATCCGGGT AAGTGTATAT GATGGTAAAA TGCATCCTGT AGACAGTAAT GATATTTCCT TCAAAATTGC TGGCATGATG GCTTTCCGCG ATGCTTTCCA TCAGGCAGCG CCGCAGTTAC TGGAACCGGT ATTTGATATT GATATTACTG CTGCGGATAC GATGGCGGGC GATGTAATGA GTGAGTTACA AAGCCGCAGA AGTATCATTA CGGGTATGGA TTCCCAGAAT GGTTACCAGG TGATCAAGGC ACGTACGCCA CAGGCAGAAC TGGATAAACT GTATGCTGCA TTGCGGAATG TGACACAAGG GAAAGCGAAG ATCAAAGCGG TCTTTGCGGA ATACGCACCA GTGCCACCGG AATTGCAGAA GAAGTTGTCC GAAGAGTATA AAGGCGCGGA GCTGGTTGCT TAG
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Protein sequence | MKTYDEKHIR NIVLLGAAKS GKTTLCETML FEAGIISRRG TVEEGNTVSD YHDVEHERGS SVYATCLHTE WRDYKINIID TPGLEDFIGE IISSIRVCDT ALLLLNAQHG VEVGTEQIWD YVDKYQKPTI LAVNQLDTEQ ANFSRTVEEA RRVFGSAVTV MQYPVDQGPG FNSVIDLLKM TMYRFPENGG KPEKLPIPDS EKEQAERLHN ELVEKAAEND DTLMEQYFEK GSLDEDEMRQ GLKIGMLKHH VFPVFCLSAL HNMGSGRLMG FIDNVAPAAI DMPAEQAEDG SPIPCDPSAS PVLFVFKTLQ EPHIGRLSFF KVLAGEIKAG VELYSEKGNT VERLNQLFIT DGRNRHPAEV LRAGDIGCTL KLKNTLTNHT LLADKQSGKQ VKPIGFPTPK VRVAIEATNK ADDEKLSEVL AELHMEDPTL EIEYNRELKQ VILHGQGDLH LALTKWRLLN IYKMHVEFLP AKIPYRETIR KHAAATYRHK KQSGGAGQFG EVFITIEPYY DGMPPYREHP VRETEEIALN WGGKLVFNNC IVGGAIEARF LPSILKGVME KMQEGPLTGS YVRDIRVSVY DGKMHPVDSN DISFKIAGMM AFRDAFHQAA PQLLEPVFDI DITAADTMAG DVMSELQSRR SIITGMDSQN GYQVIKARTP QAELDKLYAA LRNVTQGKAK IKAVFAEYAP VPPELQKKLS EEYKGAELVA
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