Gene Cpin_7068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_7068 
Symbol 
ID8363260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8844524 
End bp8845327 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content46% 
IMG OID644969201 
Producthypothetical protein 
Protein accessionYP_003126670 
Protein GI256426017 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCA AGCTGAAACT AAAACCTATA CTTTCCGCGA TCCTGGGGCT TTACCTGGTG 
ATCGGCGTAT TGCTGACCTT ATTCCAGAAA AAGTTCATCT TTCATCCGGA ACCGCTGGAG
GCGAGTTATG TCTTCAAATA CGACATTCCA TTTGAAGAAA TCAGCATCCG TATCAATGAG
AAACAGACGC TGAGCGCCAT GCTGTTTAAG GCAGATCAGC CGAAAGGTAT GGTAATATAC
TTTCATGGGA ATGCCCGTAA TATTTCCAAA TATGGAAATA AGGCCAGATT GATGCTGAAA
CGCGGCTACA GTGTGTTGAT GATGGATTAT CCTACTTATG GAAAAACCAC CGGCAAACTG
ACCGAAACGA CGATCTACGA CAACGCCCTG CATATGTATG AGGTAGCCCG GAAGTTTTAT
CCACCGGACA GTATTATCAT TTACGGAAGA TCACTGGGGA CGGCAGTCGC TGCCCAACTG
GCAGCTGTCC GCGATTGTAA ACGACTGGTG CTGGAAGCTC CGTATTTCAA CATGACAGAG
ATGGCAATGC GTTTGGTACC GCTTTACCCT TACGCGTATA TGCTCGATTT CAAGTTCCCG
ACAAATGAAT ACCTGCCCAA AGTAACAGCG CCTGTTGTCA TCATTCATGG TACGGATGAT
AAGACAATAC CGGTTGAATC AGGGAAGAAA CTGGAGAAGC TGTTCAAAAC AGGCGACCAG
TTTATAACTA TACCCGGCGC GGATCACAAT AACCTGGAGA AATATCCTGA CTATCTGAAA
GCGTTAGATG TCGCGTTGCG ATAA
 
Protein sequence
MFSKLKLKPI LSAILGLYLV IGVLLTLFQK KFIFHPEPLE ASYVFKYDIP FEEISIRINE 
KQTLSAMLFK ADQPKGMVIY FHGNARNISK YGNKARLMLK RGYSVLMMDY PTYGKTTGKL
TETTIYDNAL HMYEVARKFY PPDSIIIYGR SLGTAVAAQL AAVRDCKRLV LEAPYFNMTE
MAMRLVPLYP YAYMLDFKFP TNEYLPKVTA PVVIIHGTDD KTIPVESGKK LEKLFKTGDQ
FITIPGADHN NLEKYPDYLK ALDVALR