| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6968 |
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| Symbol | |
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| ID | 8363160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8728530 |
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| End bp | 8729438 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644969101 |
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| Product | outer membrane assembly lipoprotein YfiO |
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| Protein accession | YP_003126570 |
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| Protein GI | 256425917 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.167496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGAAAT TAGTTTTATA CATTTGTCTC TTTGTAGCGG CCACAGCTGC GGTGTCCTGT
AATACCGAGC TGCGCAGAAT TGAAAAAAGT AAGGATTACG AAGCGAAGCT TGCGTACGCC
GATAAACTGT ATGCGAAGAA AAAATACATG ACTGCTCAGA CATTGTATGA ATCTTTATTC
CAGGTATACA AAGGAACCGA CAAGTACGAG CCTATGTACT ATAACTACTG CTACTGTTCC
TACAAAATGA AGGATTATGT GCAGGCAGGT TTCTACTTCA AAAACTACCT GGATAACTTC
CCTAACAGTC CGCGCGCGAC CGAAATGGAC TACATGCAGG CTTATTGCTA TTACAAACAA
TCTCCTAAGG TAGCACTGGA CCAGACCAAT ACGCAGAAGG CGATCGCTGC CATGCAGACC
TTTATCAACA ACTATCCTAC GTCTGATAAA GTACCTGAGG CTAACCTGGT GATCGAACTG
TCCCGCAGGA AACTGGAAAA GAAAGAATAC AACAACGCCG AATTATATTA TAACCTGGGC
CACTACCAGG CGGCTGCCAT CACCTTCAAA AGCCTGATGC GTAATTTCCC GGATTCTGAT
AAGAGCGATT CTTATAAGTA TATGGCAATC AAGGCTTATT ATAACTACGC CAAAAACAGC
GTATGGGAAA AGCAGAAAGA GCGTTATGAG GATGTGCTGA GTGAGTACCT GGACTTTGCT
GACCACTACA ACGCCAGCAA ACTGAAAGGA GATGCCGAAA AATATTATAC CTTAGCGCAG
AGTAATATTA AGACGATCGA TAGCTACAAC AAGCCCGACC GTAGCAAAAA AGAAGAGAAG
AAGGCCAAAA AAGCGGTGAA TAAGGCAGAA AAAGATACCC AGCCGGGTAC GGAATCTAAA
AACAATTAA
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| Protein sequence | MRKLVLYICL FVAATAAVSC NTELRRIEKS KDYEAKLAYA DKLYAKKKYM TAQTLYESLF
QVYKGTDKYE PMYYNYCYCS YKMKDYVQAG FYFKNYLDNF PNSPRATEMD YMQAYCYYKQ
SPKVALDQTN TQKAIAAMQT FINNYPTSDK VPEANLVIEL SRRKLEKKEY NNAELYYNLG
HYQAAAITFK SLMRNFPDSD KSDSYKYMAI KAYYNYAKNS VWEKQKERYE DVLSEYLDFA
DHYNASKLKG DAEKYYTLAQ SNIKTIDSYN KPDRSKKEEK KAKKAVNKAE KDTQPGTESK
NN
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