Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6934 |
Symbol | |
ID | 8363126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8683232 |
End bp | 8684050 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644969067 |
Product | 5'-nucleotidase, lipoprotein e(P4) family |
Protein accession | YP_003126536 |
Protein GI | 256425883 |
COG category | [R] General function prediction only |
COG ID | [COG2503] Predicted secreted acid phosphatase |
TIGRFAM ID | [TIGR01533] 5'-nucleotidase, lipoprotein e(P4) family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.456006 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACACA AAAATATTTT ACTCACATGT GTATTCTTTG CCGGTATGAT TGCCTGCAAA ACAACACAGT CGCCTGTTGC GACCACACCA GCTGCACCTG CTACCGTATT ACAACCTTAT GGTCCTGCCT GGGCCGCTTT GTGGCAGCAA CGATCATCAG AGTATAAAGC GCTGTGTTTT CAGGCATATA ATATCGCCAG GGTACGATTG GATGAAAGTT TGTCACAGTC CGCCTCACAG CCATTGGCGA TTGTAACGGA TATTGATGAA ACCGTACTGG ATAACAGTCC GTATACAGTG CATACATCCT TGAAAGGCCA CGGTTACTCA GAAAAAACAT GGGCAGAATG GACGGCAAAA GCGAGTGCGG ATACAGTGCC AGGCGCATTG TCTTTTTTGC AATACGCGTC AACTAAAGGC GTGCATGTGT TTTATATCAG CAACCGTGCA GAAACAGAAC GTAACGTTAC TTTACAGAAT CTGCAACGCT GGCATTTTCC GGATGCAGAT AATGAACACC TGTTGTTAAA AACTTCTGGA TCAGGAAAGG AAAGTCGTCG TGCGCAGGTC GCACAAACGC ATAAGATCAT ATTGCTGATG GGAGATAATT TAGGCGACTT TGCAGAGATA TTTGATAAGC AACCTGTGGA TAAACGCACG GCATTCACAC AACAATCCGC TGCTGATTTT GGTAACAGAT TTATTGTATT GCCCAATCCG ATGTATGGTG ATTGGTTGCC TGCCATGTTT GAGTATAATT ATAAGCGTAG GGCAGGGGAG ATGGATTCTT TGTTGAAGAA GCAATTGAAA GATTATTAA
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Protein sequence | MQHKNILLTC VFFAGMIACK TTQSPVATTP AAPATVLQPY GPAWAALWQQ RSSEYKALCF QAYNIARVRL DESLSQSASQ PLAIVTDIDE TVLDNSPYTV HTSLKGHGYS EKTWAEWTAK ASADTVPGAL SFLQYASTKG VHVFYISNRA ETERNVTLQN LQRWHFPDAD NEHLLLKTSG SGKESRRAQV AQTHKIILLM GDNLGDFAEI FDKQPVDKRT AFTQQSAADF GNRFIVLPNP MYGDWLPAMF EYNYKRRAGE MDSLLKKQLK DY
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