| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6880 |
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| Symbol | |
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| ID | 8363072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8617332 |
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| End bp | 8620577 |
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| Gene Length | 3246 bp |
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| Protein Length | 1081 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644969013 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126482 |
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| Protein GI | 256425829 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0740093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.354898 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA GAGCGTTACT CTTTTTCACC ATGCTCATGG TGAGTGTAAC CCTGACGTAT
GCACAACAGC GTCAGATTAC GGGTAAGGTC ACCGGTGCAG ACGGGTCGCC TATACCTTTC
GCAACAGTAC AAATTAAAGG GACAACAAGC GGAACCACAT CAGATCAACA AGGAAATTTC
AAATTATCTG TAACAGGCGC AAACCCTGTA TTGGTAATCA GAAGCGTTGG TTATGCAACA
ATTGATTACA CCGTAGGTGC ATCTTCTGCA TTTACCGTAC AATTGAAAGA GGAGGACAAA
AACTTACAGG AGGTTGTAGT TACAGCCCTT GGTATTACCA GAAAAAAGAA TGAGCTGGCT
TACTCCGCTC AGACTGTTCA GGCAGAAGAA CTGAACAGAA CACGTGATCC GAACGTTGTG
AACTCCCTGT CCGGTAAAGT ATCCGGTCTG GAAGTTAGAA GGAACAGCAC CATGGGTGGT
TCTACCAACA TCGTACTGCG TGGTAACAAA TCATTCCAGA ACTCAAACCA GGCATTATTC
GTAATTGATG GCGTACCTGT TGATAACTCA GTAGCTAACA CACCTGACCA GACTACTGGC
CGTGGTGGTT TCGACTACGG TAATGCTGCT TCCGATATTA ACGCTGACGA CGTAGCTTCT
GTAAGCGTAC TGAAAGGTGC TGCTGCAGCT GCGCTGTATG GTTCACGTGC CGCTAACGGT
GTGATCATGA TCACTACCAA AAAAGGCAGA TCAGGTATGA ACGTAACTGT GAATACCGGT
TTGACTGTAG GTACAATGGA TAAGAGCACA TTCCCTAAAT ATCAGAAACA ATACGGTGCT
GGTTACTACG ATGTTGAAGA TAATACTTAC CAGTCTCCGG ATGGCCATTT CTGGTATGCA
GATATCGATG GTGATGGTAC ACGTGACCTG GCAGTACCAA TGAAAGAAGA TGCTTCTTTC
GGTGCTAAAT TCGATCCAAA CCTGATGGTG TTCAACTATC AGTCACTCGA TCCAAGATCT
CCTTATTACA AAAAAGCAAG ACCTTGGGTA GCTGGTGAGC ATGATCCATC TTACTTCTAT
AAAAATACAC TGACTACCAA CAATAGCGTA GCTGTTGACG GTGGTAACGA TAAAGGAAAT
TTCAAACTGG GATACACCAA AACAGTTGAA AACGGTATGA TCCCGAACGC TCGTCTTGTA
AAAGACATGT TGAACTTCGG CGCATCTTAC AAACTCACAG ACAGATTAAC TGCGAGTGCA
AATGTGAATA TGTCTAAAAT TGATGGTAAA GGCCGTTATG GTACCGGTTA TGACGAATAT
AACGTGAACC AGGCTTTCCG TCAGTGGTGG CAGATGAACA TCGACATGAA AGATCAGAAA
GACGACTACT TCAGAGATAA ACTGAACAAG TCATGGAACC TGACAAGCCC TACCAATCCG
GTTCCAACTT ATACTGATAA CTTCTACTTC ATGAGATACG AAAACTTCGA ACAGGATGGT
CGTATCCGCT ACTTCGGTAA CGTTACACTG AATTATCAGA TCAACAGCTG GTTGTCTGTT
TTAGGCAGAA CAAGCATGGA TACTTACAAT CAGTGGCAGG AAGAGCGTAA TGCCGTAGGT
AGTAAAAACC CTTCTTCATA TTCAAGATAT GATGGTTCTT TCATCGAGAA CAACTATGAC
CTGTTGCTGA ATGTTGACAA ACAATTAAGC ACAGATTTCA AATTAACCGG TTTAGTGGGT
GGTAACATCA GACGTACACA CGCTAAGTAC ATCCGCGCTT CCACCAATGG TGGCCTGGTT
GTACCTCACC TGTATTCACT GTCCAACTCT GTAAATCCAC TGACTGCTCC TGAAGAAGCA
GATAGCTTGA TGCAGGTGAA CGGTCTGTTT GCAAGTGCAA CGATCGGTTA TAAAAACATG
TTATTCCTGG ATCTGGCAGG TCGTCGTGAT GAATCATCTA CACTGCCGGC TAATAACAAC
TCCTACTACT ACCCGGCGGC TTCATTAGGT TTTACCTTCT CTGAAGTAGT AAAAGCTAAA
TGGCTGAATT ATGGTAAAGC GCGTATCAAC TACGCTGAAG TAGGTAACAG TGCTCCTGCA
CAGGCGTTAT ACGATCCGTA TGATAAACCA ACCGGTTTTG GTAGCACGCC AATTTTCTCT
GTACCTGCTA CAAAGAGAAA TCCGGACCTG AAACCAGAGC GTACAAAATC ATTCGAAACA
GGTGTTGAAC TCGCATTATT CGACAACATC GTGACTTTGG ATCTGACTTA TTATGCATCT
AAATCTGTTG ACCAGATCCT GAGATTACCT ATCTCAAGAG CTACCGGTTA CGATCAGATG
TTCATCAACG CTGGTACTAT CCGTAACAGA GGTGTGGAAG TAAGCCTGGG GGTAACACCG
GTTAGAATAA AGAACTTCTC CTGGACAGTG AACGCAAACT GGTCTTTGAA CAGAAGTAAA
GTACTGGATC TGCCGGAAGG ACTTGACTTT ATCCAGTTAG GCGCCCTGCA GAGCAACGTA
ACTATCGGTC ACGCTGCTGG TCAGGCATAT GGTGTGATCC GTGGTAAAGA TTTCATCTAC
GACAAAGCTA CTGGTCAACG TGTAGTTGAA GACCAGGAAG GCCAGGCTGT TTTGCCAGGT
TACTATAAAA CGACAGCAAC TGCGAATGAA GTGATCGGTA ACTACACGCC AAAATGGATT
GGTGGTGTAA CCAACACCGT TCGTTATAAA GGTCTGGCAC TGTCTTTCCT GATCGATATC
AAGAAAGGTG GCGATACCTA CTCCCTTGAC CAGGCTTACG GACAGTCAAC CGGTATCTAC
GAAGAAAGCG TAAGACTGAA CGATCAGGGT AAAAATATCA GAGACGATGT TGCACAAGGT
GGCGGTATCA TCTTCGAAGG TGTAACCAGC GACGGTAAAC CTAATACACA GCGTGTACGC
GTGAGTGGTA CGCGTGGTCT GGGTGTGAAT GGTTATCCAA ATAAAGAGTT CATCTATGAT
GCAGGTTATG TAAAACTGCG TGAGGTGTCT TTGACATACT CTCTGCCAGG AAGCCTGGTG
AATAGCCTGA AAGCATTTAA AGGTATCGAC ATCAGCCTGC TGGGACGTAA CCTGTGGATT
ATCCACAAAA ACGTTCCTTA TGCTGATCCT GAAGAGAACC TGGCAGCAGG TAACATCCAG
GGTTACCAGA GTGGTGTTTA TCCTACTTAC CGCAACTTTG GTTTTAACGT GAGATTCCGC
TTCTAA
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| Protein sequence | MKKRALLFFT MLMVSVTLTY AQQRQITGKV TGADGSPIPF ATVQIKGTTS GTTSDQQGNF
KLSVTGANPV LVIRSVGYAT IDYTVGASSA FTVQLKEEDK NLQEVVVTAL GITRKKNELA
YSAQTVQAEE LNRTRDPNVV NSLSGKVSGL EVRRNSTMGG STNIVLRGNK SFQNSNQALF
VIDGVPVDNS VANTPDQTTG RGGFDYGNAA SDINADDVAS VSVLKGAAAA ALYGSRAANG
VIMITTKKGR SGMNVTVNTG LTVGTMDKST FPKYQKQYGA GYYDVEDNTY QSPDGHFWYA
DIDGDGTRDL AVPMKEDASF GAKFDPNLMV FNYQSLDPRS PYYKKARPWV AGEHDPSYFY
KNTLTTNNSV AVDGGNDKGN FKLGYTKTVE NGMIPNARLV KDMLNFGASY KLTDRLTASA
NVNMSKIDGK GRYGTGYDEY NVNQAFRQWW QMNIDMKDQK DDYFRDKLNK SWNLTSPTNP
VPTYTDNFYF MRYENFEQDG RIRYFGNVTL NYQINSWLSV LGRTSMDTYN QWQEERNAVG
SKNPSSYSRY DGSFIENNYD LLLNVDKQLS TDFKLTGLVG GNIRRTHAKY IRASTNGGLV
VPHLYSLSNS VNPLTAPEEA DSLMQVNGLF ASATIGYKNM LFLDLAGRRD ESSTLPANNN
SYYYPAASLG FTFSEVVKAK WLNYGKARIN YAEVGNSAPA QALYDPYDKP TGFGSTPIFS
VPATKRNPDL KPERTKSFET GVELALFDNI VTLDLTYYAS KSVDQILRLP ISRATGYDQM
FINAGTIRNR GVEVSLGVTP VRIKNFSWTV NANWSLNRSK VLDLPEGLDF IQLGALQSNV
TIGHAAGQAY GVIRGKDFIY DKATGQRVVE DQEGQAVLPG YYKTTATANE VIGNYTPKWI
GGVTNTVRYK GLALSFLIDI KKGGDTYSLD QAYGQSTGIY EESVRLNDQG KNIRDDVAQG
GGIIFEGVTS DGKPNTQRVR VSGTRGLGVN GYPNKEFIYD AGYVKLREVS LTYSLPGSLV
NSLKAFKGID ISLLGRNLWI IHKNVPYADP EENLAAGNIQ GYQSGVYPTY RNFGFNVRFR
F
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