| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6839 |
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| Symbol | |
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| ID | 8363031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8566336 |
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| End bp | 8567910 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968972 |
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| Product | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase |
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| Protein accession | YP_003126441 |
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| Protein GI | 256425788 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.293923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCG AAATCAAAGT TCCTACGGTA GGAGAATCTA TTAGCGAGGT AACAATTGCA
AAGTGGTTGA AGAAAGACGG AGATTATGTA CAGCAGGATG AGGTGATCTG TGAAATGGAA
TCTGAAAAAG CCACCTTTGA ACTGAATGCA GAAAAAGCAG GGGTCCTGAA AATACTGGCT
CCGGAAGGCG CTACTTTAAA AGTAGGCGAT ATTGCTTGTT CAATTGATAC GGATGCTGCG
GCTCCGGCAG GCGGATCAGC ACCAGCTGCT GCACCTGCAG CGCCAGCTCC TGTAGCAGAA
ACACCGGCGC CGGCGGCAGA AGCTCCTGCA GCACCGGCGG TGAACAAAGG AACGATTGAG
ATGAAAGTGC CTACTGTGGG CGAATCCATC AGCGAAGTGA CATTGATCAA GTGGCTGAAG
AAAGACGGCG AGTTTGTAGA GCGTGATGAA GTGATCTGCG AACTGGAATC TGAAAAAGCT
ACTTTCGAAC TGAACGCAGA AGAAGCTGGT GCATTACAGA CTTTAGGTAA AGAAGGAGAT
GTATTAAAGG TAGGTGATCC TATCGCTAAA ATAGATACCA GTGTAGGACG CCCTGCAGGT
AAAGCACAAC CGGCAGCGGC TGCTGCTCCG GCTGCGACAC CACAGGCTGC CCCACAGGTA
CAACAGGCGC CTGTAACCGC TATCCCGAAC GATGTGAAAG CAAGTCCGGT AGCAGCCGCA
GTAATCGCCG ACAAACACGT AGATCCGTCC TCTATCAAGG GTACCGGCGC TCATGGCAAA
ATCATGAAAG ATGATGTTTT TGCTGCGCTG CAGAACCCGG GTGTGGCTAT CGGTCAGGAA
ATGTTCACCC GCGCAGAACG TCGCGAGAAA ATGAGCAACC TGCGTAAGAC CGTTTCCCGC
CGTCTGGTAG AAGCGAAAAA CACCACGGCG ATGCTGACTA CCTTCAACGA GGTAGATATG
ACAGCAATCA TGGAACTGCG TGCTAAATAC AAAGAGATCT TCAAGAAACA ACACGAGGTG
AACCTGGGCT TCATGAGCTT CTTCACTAAA GCGGTTTGTT TCGCACTGAA GGAATTCCCT
TCTGTGAATG CATATATCGA TGGCGAAGAA CTGGTATTCC ACGACTACTG TGATGTATCC
ATCGCAGTAT CTGCACCGAA AGGGCTGGTA GTACCGGTGA TCCGTAACGC GGAAAGCCTG
GATATGGCAC AGATCGAGAA GAAAGTTGTA GAACTGGCTA CAAAAGCCCG TGACAACAAA
CTCACCATGG ATGAAATGAC CGGTGGTACC TTCACCATCA CCAACGGTGG TGTATTCGGT
TCCCTGATGA GTACTCCGAT CATCAATATC CCGCAGTCTG CTATCCTGGG TATGCACAAA
ATTCAGGAAC GCCCGATGGC TGTTAACGGA CAGGTAGTAA TCCGTCCGAT GATGTACCTG
GCACTCAGCT ATGACCACCG TATCATTGAT GGTCGTGAGT CTGTAAGCTT CCTGGTACGT
GTGAAAGAAA TGCTGGAAAG CCCTGAGCAG TTACTGTTCG GTAAAGATCC ACTGAAAGCA
TTACTGAAAC TCTAA
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| Protein sequence | MAIEIKVPTV GESISEVTIA KWLKKDGDYV QQDEVICEME SEKATFELNA EKAGVLKILA
PEGATLKVGD IACSIDTDAA APAGGSAPAA APAAPAPVAE TPAPAAEAPA APAVNKGTIE
MKVPTVGESI SEVTLIKWLK KDGEFVERDE VICELESEKA TFELNAEEAG ALQTLGKEGD
VLKVGDPIAK IDTSVGRPAG KAQPAAAAAP AATPQAAPQV QQAPVTAIPN DVKASPVAAA
VIADKHVDPS SIKGTGAHGK IMKDDVFAAL QNPGVAIGQE MFTRAERREK MSNLRKTVSR
RLVEAKNTTA MLTTFNEVDM TAIMELRAKY KEIFKKQHEV NLGFMSFFTK AVCFALKEFP
SVNAYIDGEE LVFHDYCDVS IAVSAPKGLV VPVIRNAESL DMAQIEKKVV ELATKARDNK
LTMDEMTGGT FTITNGGVFG SLMSTPIINI PQSAILGMHK IQERPMAVNG QVVIRPMMYL
ALSYDHRIID GRESVSFLVR VKEMLESPEQ LLFGKDPLKA LLKL
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