Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6825 |
Symbol | |
ID | 8363017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8550252 |
End bp | 8551019 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644968958 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003126427 |
Protein GI | 256425774 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.966986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTTAC AATCTTTTGA TCTGACAGGT AAGACCGCCC TGGTAACAGG GTGTAAAAGA GGCATTGGTA TGGGGATGGC GGTAGCGCTG GCAGAAGCAG GCGCGGATGT TATCGGTGTA TCCGCCTCAC TGGAAAAAGA AGGAAGTGAA GTGGAGAAAG CGGTGAAGGC GACAGGCCGG CAATTCTACG GTTACCAGTG TGATCTGGGA AGCCGGGAAG CGCTTTATGC CTTTGTGAAA GAAGTACATA CCAATCATCC TGTAGTGGAT ATACTGGTGA ATAATGCCGG CACTATTCTC CGGAAACCAG CGGCAGAACA TCCTGACGAA TACTGGGATG AAGTGATCAA TATCAATCTG AATGCGCAGT TTATTCTTAC CCGTGAAATC GGTAAAGGAA TGATCGAACG AGGCAGCGGA AAGATTATCT TTACAGCATC GCTACTCACC TTCCAGGGAG GTATCAATGT GCCCGGATAT GCCGCCAGTA AAGGAGCTGT AGGTTCACTG GTGAAGGCAT TCGCCAATGA ATGGGCAGGT AAGGGGATCA ATGTGAATGC AATAGCACCG GGATATATCG CTACCGACAA TACAGCTGCA TTACGTGCAG ATGAAAAACG CAGTGCTTCT ATATTGGAGC GTATCCCTGC AGGCAGATGG GGAGAACCAG CCGATTTTAA AGGACCGGTT GTATTCCTGG CATCTGCGGC GGCTGACTAT GTACATGGCA CGATACTGAC TGTTGACGGA GGATGGATGG GGCGTTAA
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Protein sequence | MILQSFDLTG KTALVTGCKR GIGMGMAVAL AEAGADVIGV SASLEKEGSE VEKAVKATGR QFYGYQCDLG SREALYAFVK EVHTNHPVVD ILVNNAGTIL RKPAAEHPDE YWDEVININL NAQFILTREI GKGMIERGSG KIIFTASLLT FQGGINVPGY AASKGAVGSL VKAFANEWAG KGINVNAIAP GYIATDNTAA LRADEKRSAS ILERIPAGRW GEPADFKGPV VFLASAAADY VHGTILTVDG GWMGR
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