| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6811 |
|---|
| Symbol | murQ |
|---|
| ID | 8363003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 8532794 |
|---|
| End bp | 8533594 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644968944 |
|---|
| Product | N-acetylmuramic acid-6-phosphate etherase |
|---|
| Protein accession | YP_003126413 |
|---|
| Protein GI | 256425760 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2103] Predicted sugar phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00274] N-acetylmuramic acid 6-phosphate etherase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00997485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.000351646 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTTACTA CAGAAATGTC TTCCCATTTT AATAATCTGG AGAAGATGAG TGTTCGCGCC
CTGTTGGAAG GGATCAATAG TGAAGATATC ACGGTTCCGC TGGCAGTGGC AAAAGCAATT
CCACAAATAG AATTACTGGT TACTGCAACA GTTGAAAAGA TGAAGCAGGG AGGTCGCCTG
TTTTATATAG GAGCAGGTAC CAGCGGTCGC TTAGGTATAC TGGATGCGTC CGAATGTCCG
CCGACATTTG GCGTGCCGCA TGAAATGGTC ATAGGTATTA TCGCAGGAGG CGATACGGCT
ATCCGGAAGG CTGTAGAGTT TGCAGAAGAT GATACGCAAC AGGCAGCAAA AGACCTGGAT
AATTATCATA TTAATGAGAA AGATGTAGTC ATAGGTATCG CTGCATCAGG CACAACGCCT
TATGTGATTG GTGGTGTAAA GGCAATGAGG GAGAGAGGTA TTGTCACCGG ATGTGTTACC
TGTAATGTGG GGAGTCCGCT GGCAGCTGAG GTACAATATC CTGTAGAAGC GGAAGTAGGT
GCAGAGTTTC TGACCGGCAG TACCCGCATG AAATCTGGTA CCGCACAGAA ACTTATACTG
AATATGATCT CTACCTCAGT AATGATACAG TTAGGAAGGG TAAAGGGGAA TAAGATGGTA
GATATGCAGC TGAGCAATCA TAAACTGGTG GATCGCGCAA CGCGGATGGT GATGAGTGAA
TTGAATGTAG ACGAGGCTAC GGCTCGTCAG CTGATAGCAG AAAAAGGCAG TGTAAGAGCG
GCCATTGAAG GCAGAAAATA A
|
|---|
| Protein sequence | MLTTEMSSHF NNLEKMSVRA LLEGINSEDI TVPLAVAKAI PQIELLVTAT VEKMKQGGRL
FYIGAGTSGR LGILDASECP PTFGVPHEMV IGIIAGGDTA IRKAVEFAED DTQQAAKDLD
NYHINEKDVV IGIAASGTTP YVIGGVKAMR ERGIVTGCVT CNVGSPLAAE VQYPVEAEVG
AEFLTGSTRM KSGTAQKLIL NMISTSVMIQ LGRVKGNKMV DMQLSNHKLV DRATRMVMSE
LNVDEATARQ LIAEKGSVRA AIEGRK
|
|---|
| |