Gene Cpin_6782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6782 
Symbol 
ID8362974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8493256 
End bp8493798 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID644968915 
ProductPEBP family protein 
Protein accessionYP_003126384 
Protein GI256425731 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.756882 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TGTACACGTT CCTGGCGTTG ATGGTCTTCG CCTGTTCTGC CGTAGCGCAG 
ACATTTACAC TGAAGAGTAA TGATCTTGGC GGCCAGTTTG TCAATAGCCA GTTACTGAAT
GGAATGATGG GATATACAGG TGGGAATGTC TCTCCGCAGT TGTCCTGGGA GAATGCGCCT
GCGGGTACGC AGTGTTTTGC CGTAACGATG TATGATGTGG ATGCTCCCTC CGGTAGTGGT
TTCTGGCATT GGGTACTGTA TAATATTCCG GCAGATGTAC ATGAATTGCC GGCCGGCGCT
GGTACGCCTG AGCGTAAATT ATTGCCTGCA GGTGCAGCTC ATGGTATCAA TGATGCGGGT
ATGCCAGGAT ACCTGGGGCC TGGTCCTCTG CCAGGATTAC CACATCAGTA TATCATCACG
GTGTTTGCAC TGAAGACAAA AATAAACCCT GACAAGAGTA CGCCTGCTGC ATTTGTCGGA
GTGCTGCTGA ATCAGAACTT ATTAGCCAAG GCGTCTATTG TAGGTTATTC ACAACATCCA
TAA
 
Protein sequence
MKRMYTFLAL MVFACSAVAQ TFTLKSNDLG GQFVNSQLLN GMMGYTGGNV SPQLSWENAP 
AGTQCFAVTM YDVDAPSGSG FWHWVLYNIP ADVHELPAGA GTPERKLLPA GAAHGINDAG
MPGYLGPGPL PGLPHQYIIT VFALKTKINP DKSTPAAFVG VLLNQNLLAK ASIVGYSQHP