Gene Cpin_6765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6765 
Symbol 
ID8362957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8474856 
End bp8476268 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content50% 
IMG OID644968898 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_003126367 
Protein GI256425714 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGTTTA TCCTTAATAA TGAAGATGTT GGTACCACCC TGCCCCCTGG TATGCCGCTG 
CTGGATTTCA TCAGATATCA TCAGCACCTG ACCGGTACAA AAACCGGTTG CAATGAAGGT
GACTGCGGCG CCTGCACCAT ACTCGCGGGA GATCTGAAAC AGGGCGTATT GGTATATCGC
GCGTGGACCT CCTGTCTGAC GCCGCTGGGT AATGCCCATG GTAAACATAT CGTCACCATA
GAAGGGATTA ATATGTTGCC GGCACTCAAT CCCATACAAC AGGCAATGGC CGATAACTGC
GCCACACAAT GCGGTTTTTG TACACCCGGA TTCGTTATGT CGCTGGCAGG CTTCTGCCTC
GACAGGAAAA CACCTGATGC CGAAAATGCC ATTGCCGCCA TTGACGGGAA TATCTGCAGA
TGCACCGGTT ATAAGTCTAT CGAAAGAGCC GCCGGCACAG TGGCAGGATT GCTGACTGAC
AGAAATGGCG AGGAACCGGC CATATTTGCC ACTAGACAAC AAATACTCCC TGAATACTTC
GCAGGCATAA AAGAGCGCTT AAAAAGCCTT ATTCCAACCT TAAACGGCGA ATTAAACCCT
CCTTCCGATA CTCATCCAAG ATTTGTCGGT GGAGGTACCG ATTTATATGT ACAACAACCT
GAAGCTATAC AGGAACAGCC CATCCGCTTC CTCCTGGGGC AGGAACTGCT CAAAGGCATT
ACCAGGGAAG ACAACCGCTG TGTATTAGGC GCTTCCGTCA CCGTGAACGA CATCCTGGAA
TCGTCTATTA TGCGCACCTG GTTTCCGGCA CTCGGCAATT ACCTCAAACT GGTATCTTCC
ACACCTGTCA GGAACATGGC TACCATCGCC GGTAACTTCG TCAATGCCTC CCCTATCGGA
GACATGACCA TCTTCTTCCT GGCACTGGAT GCCACCCTTG AACTGAGCGA CGGACAATCT
GTACGAACAT TGCCGCTGCG CGATTTGTAT AAAGGATATA AACAGTTGAA CAAGACATCC
GCAGAATATA TCACCCGTTG CTGGTTTGAA TTACCAGGAG ACAGCACCGG CTTCAATTTC
GAAAAAGTCA GCAAACGCAC ACACCTGGAT ATTGCCAGTG TCAACAGCGC GATCAGCATT
ACAATAGCCG CCAACCTGAT CAGCGATATA CGGATCTCCG CCGGCGGTGT TGGTCCGGTA
CCGCTACTGC TCACAGATAC CGCCGCCTTC CTGAAAGGAA AAGCACCCGG TACAGCAACC
ATCAAACAGG CCTGTGCCAT TGCACAACTG GAAATCACCC CTATCAGCGA TACAAGGGGC
ACCGCAGAAT ATAAAAGACT CTTACTTGAA CAACTGATAA AAGCACATTT CATCACCTTG
TTTCCTACCC TCCAGGTGGA ACTGTTATTA TAG
 
Protein sequence
MKFILNNEDV GTTLPPGMPL LDFIRYHQHL TGTKTGCNEG DCGACTILAG DLKQGVLVYR 
AWTSCLTPLG NAHGKHIVTI EGINMLPALN PIQQAMADNC ATQCGFCTPG FVMSLAGFCL
DRKTPDAENA IAAIDGNICR CTGYKSIERA AGTVAGLLTD RNGEEPAIFA TRQQILPEYF
AGIKERLKSL IPTLNGELNP PSDTHPRFVG GGTDLYVQQP EAIQEQPIRF LLGQELLKGI
TREDNRCVLG ASVTVNDILE SSIMRTWFPA LGNYLKLVSS TPVRNMATIA GNFVNASPIG
DMTIFFLALD ATLELSDGQS VRTLPLRDLY KGYKQLNKTS AEYITRCWFE LPGDSTGFNF
EKVSKRTHLD IASVNSAISI TIAANLISDI RISAGGVGPV PLLLTDTAAF LKGKAPGTAT
IKQACAIAQL EITPISDTRG TAEYKRLLLE QLIKAHFITL FPTLQVELLL