Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6760 |
Symbol | |
ID | 8362952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8471035 |
End bp | 8471586 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644968893 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003126362 |
Protein GI | 256425709 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATAAAC TGATCAACCC ACAAAGTGCA AAGGATATAT ACAGGCAGTG CTTTCAAGAT AACTTTGAAC GCCTGCACCG CTATGCCTTT ACACTGTTAC AGGATAATGA GGAAGCCAGA GACGTTGTGC AACAGGCTTT TATCAAACTC TGGCAGAAAA GGGACGAGAT CAACCTGGAG CTGGCGGGCA GGTCATACCT ATATACTACG GTACAGCGAC AGTGTATTAA TATTTTCAGG CATAACAAGG TCAGACGGCA TTATAAAGAT TCGGTAATGG CTACACATCA GGAGGAGTAC ACGGATCATC AGCTGGAAAA CCGGGAACTC AGTAACAGGA TCAGTACTGC TATGGATGCT TTACCACCGA AATGCAGGGA GATATTCTGC AAGAGTCGTT TTGAGGAGAA GAAATACGCA GAGATTGCCG CAGAACTAAA TATATCGGTC AAGACTGTAG AGGTGCAGAT GGGCAAGGCC CTCAAGATAA TGAGGGAACA GCTGGCAGAT ATCATCACAA TATCCATTAT TCTCATTGCA TATTTCAAAT AG
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Protein sequence | MNKLINPQSA KDIYRQCFQD NFERLHRYAF TLLQDNEEAR DVVQQAFIKL WQKRDEINLE LAGRSYLYTT VQRQCINIFR HNKVRRHYKD SVMATHQEEY TDHQLENREL SNRISTAMDA LPPKCREIFC KSRFEEKKYA EIAAELNISV KTVEVQMGKA LKIMREQLAD IITISIILIA YFK
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