| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6731 |
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| Symbol | |
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| ID | 8362922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8431269 |
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| End bp | 8431865 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644968863 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003126333 |
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| Protein GI | 256425680 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.167453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.578236 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGTTCCTAC TTTTACCGCA GCATTCAAAC GATAGGAAAT TGTCATATTC ATCCTTACCA
GAGGAGCAGG AATTATTACG GCAGATTGCC AGGGGTGACG AGTCTGCATA TACACTTGTA
TTTAATCATT ATAGTAAACA AGTGTTCAAT GTAGCCATGC TTTATCTGAA AGACACCACA
CCGGCCCGGG AGGTCGTACA GGAGGTTTTT CTGAAAATAT GGCTGAAAAG GGAAACTATG
TCCGATGTGG AAGACCTCAC CGGTTATCTC TTCATTCTTA CCCGTAATCA TATATATGAC
AATTTCAAAA AACAGGCTAA TCTCCTGAAA GCACTGGACA GCTTCATCCA GTTACAACCT
GCAGCCATTG CAGATACCGA CCACCGCCTC CAGCAACACC AGTACGATCA CCTTTTGAAC
AAAGCGGTAT CCAGCCTTCC CCCTGAACGT AAAAAGGTAT ATATCGCCCG TAAAGAGGGA
CTGAGTAATG AAGAGATCTC CCATAAAATG AACATTTCCA TTCATACTGT CAAGAAACAG
ATGCAACTAG CCGTACAAAC AGTCAGAAGT TTTGTGAAAC AGCAGCTCCA TATCTGA
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| Protein sequence | MFLLLPQHSN DRKLSYSSLP EEQELLRQIA RGDESAYTLV FNHYSKQVFN VAMLYLKDTT
PAREVVQEVF LKIWLKRETM SDVEDLTGYL FILTRNHIYD NFKKQANLLK ALDSFIQLQP
AAIADTDHRL QQHQYDHLLN KAVSSLPPER KKVYIARKEG LSNEEISHKM NISIHTVKKQ
MQLAVQTVRS FVKQQLHI
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