Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6677 |
Symbol | |
ID | 8362868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8372490 |
End bp | 8373524 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644968811 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003126281 |
Protein GI | 256425628 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAAAC AATACCGGAT ATTAGGAATC ATCATTTCAC TCGGAATAGG TCTGGCCGCA GTACCCATTA AATTGACCGG AAGTGATGTT CATTCGGGTG GTCTATATTT AGCGGTACGC ACAATCAGAT ATACTTTCAC AGCAGGACTA CTTGCATTTT TTTTACACCT TTGGTTGAAC AGAAAATATG CCTTGCTTCA CAATAAAGGA CGATATCTGG CCTACGTATG CAGCATCATA TTTGTTACCA TAGCTGTTTT TATCGCTTCT ATCTTACTCG ATTTTGTATT TAGCAGACTA TCGACAAACT CCTCCTTATC CATTGCCATA GAGGATCTGA ACTGGTACCT GATGATATTA AGGTGTTTAC TGCTTAGTAT GGTACAATTT CTTATTGTAT TTTATTTGCA ATTATTGAGA GAAAGGCAAA ATCGTATTCT TGAATTAGAA AAGCTTAAAC AAGCGCAGTT GGAAGCCGAT TTGTCCAATT TGAAGGAGCA AATGAGTCCA CACTTTTTGT TTAACACATT AAATACTTTA ATCTCGATAA CACAGGAAAA ACAGGTTAAA GATTACGTTG CTGATCTTGC CAGTGTTTAT AGATATATGC TGGTTCATAA TAAGTTGCAT GTTGTTTTAA TAGAAAACGA ATTAAATTTC ATCAAGTCTT ACTTATATAT TATTAAAACA CGCCTAGGAG ATGCCATTGA AATAGACATT CATCTTGAAG GGGAATTAAT GCAGACCCTG ATACCTCCAC TGACATTACA ACTTTTGCTG GAAAACGCGA TTAAACATAA TATAGCATCT GTTGGCAAAC CTTTAAGAAT ACAGATCTAT AATGACGCAT CGTTTATCAT CATAAGTAAT AATCTCAACC CAATGAAATC ACAGTATTAT TCAACGGGGG TCGGACTAAG TAATTTGCTG AACCGCTATC AGCTCTTATT TTCCGGAAAT TTAATAATTG AAAAAAGCTC AACAATGTTT ACTGTTAAGT TGCCTATATA TGAGAATTTT AATTATAGAG AATGA
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Protein sequence | MWKQYRILGI IISLGIGLAA VPIKLTGSDV HSGGLYLAVR TIRYTFTAGL LAFFLHLWLN RKYALLHNKG RYLAYVCSII FVTIAVFIAS ILLDFVFSRL STNSSLSIAI EDLNWYLMIL RCLLLSMVQF LIVFYLQLLR ERQNRILELE KLKQAQLEAD LSNLKEQMSP HFLFNTLNTL ISITQEKQVK DYVADLASVY RYMLVHNKLH VVLIENELNF IKSYLYIIKT RLGDAIEIDI HLEGELMQTL IPPLTLQLLL ENAIKHNIAS VGKPLRIQIY NDASFIIISN NLNPMKSQYY STGVGLSNLL NRYQLLFSGN LIIEKSSTMF TVKLPIYENF NYRE
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