Gene Cpin_6653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6653 
Symbol 
ID8362842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8343580 
End bp8345085 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content46% 
IMG OID644968786 
Productalkaline phosphatase-like protein 
Protein accessionYP_003126258 
Protein GI256425605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGA AACACTTGTT ACCGTTTGCC ATTATGGCTA TCCTTGCGGC CTGTTCAAAA 
GATGACAACC CTAATGAACC AACCGTTAAT GAAGATCCTT CCACGTTCGC AGAAATTGGC
ACATTAGACA TCGGTGAAGC AGGTGCAGCT GAAATCAGCG CTTACGATCC GACTACTAAA
AGACTGTTTG TTGTCAATAA CGGCGGTGTT AATAAGATCG ATGTGATAGA TCTGAGCGAT
CCTGGTAACA TGAAGGTGAT CCACTCCATT CCTACCAACA GCGGTGCGGT AAACAGCGTA
TCTGTATACG AGGGTAAACT GGCGGCTGCT ATTGAAGCTG TGGATAAACA ACAACCAGGC
AGAGTAACCG TTTATAATAC CAATAGCTAC GCAGAGATCA AGACCATCGC TACCGGCGCA
TTACCAGATA TGGTAACCTT CAGCCCGGAT GGTAAATATA TTCTGACTGC CAATGAAGGC
GAACCAAATG CAGATTATAC AAACGATCCG GTAGGTTCTG TTTCTGTGAT CAGCGTAAGC
GATAACTACA GCGTTGTAAA CATCGACTTC AGCAGCTTCG CATCACAGCA GACAGCCCTG
CAGCAGAAAG GTCTCCGCGT ATTCGGTCCG AATGCTTCTT TCGCACAGGA TATGGAACCG
GAATATATTG CCGTATCACC GGATTCTAAA ACTGCCTGGG TAACCCTGCA GGAAAATAAC
GCGATCGCAA AGATCGACCT GACCACTAAA ACTGCGACAA ACATCTTCCC ATTGGGTTTC
AAAGACTATA ACCAGGATGC AGATGCGATC GATCCTTCTG ATAAGGATAA CGCCATTGCT
TTCGGTAAAT GGCCGGTAAA AGGCATCTAT ATGCCAGATG CGATTGCCGT TTTACAAACA
GATGGTGGTA TTCCTTACCT GTTCACCGCA AACGAAGGTG ATGTACGTGA ATACACCGCT
TTTGCAGAAG CAAAACGCGT TAAAAGCCTT ACCCTGGATG CAACTGCATT TCCTAATGCA
GCTGACCTAC AGAACGATGC TAAACTTGGC CGTCTGAACG TAACGACTAC CCTTGGCGAT
GTTAACGGTG ATGGTATCTA TGAATCACTG TACTCCTTCG GTGCACGTTC TTTCAGCGTA
TGGAACGGTA CCAGCGGTGC ACTGGTATAT GACAGCAAAA ATGAACTGGA AACAAAAGTA
AATGCTGCTG GTTATTATGA CGACAACCGT AGTGATGATA AAGGTGTGGA ACCGGAAGGT
ATCACCCTGG GTAAAGTAGG TAACAGAAAT ATTGCTTTCG TGGGCATGGA AAGAGTAGAT
GCAGTTGCTG TGTATGATGT GACCAAACCA GAAGCGCCAT CCTTCCTCCA GCTCCTCAAA
TCAGGTGATG CACCGGAAGG CGTGTTGTTT GTATCAGCAG CGAATAGCCC CACCGGCAAG
AGCCTGCTGA TCGTGAGCAG CGAAGATGAC GGCGTATTAA AAGTATATTC TCCGAAGACT
TTATAA
 
Protein sequence
MKLKHLLPFA IMAILAACSK DDNPNEPTVN EDPSTFAEIG TLDIGEAGAA EISAYDPTTK 
RLFVVNNGGV NKIDVIDLSD PGNMKVIHSI PTNSGAVNSV SVYEGKLAAA IEAVDKQQPG
RVTVYNTNSY AEIKTIATGA LPDMVTFSPD GKYILTANEG EPNADYTNDP VGSVSVISVS
DNYSVVNIDF SSFASQQTAL QQKGLRVFGP NASFAQDMEP EYIAVSPDSK TAWVTLQENN
AIAKIDLTTK TATNIFPLGF KDYNQDADAI DPSDKDNAIA FGKWPVKGIY MPDAIAVLQT
DGGIPYLFTA NEGDVREYTA FAEAKRVKSL TLDATAFPNA ADLQNDAKLG RLNVTTTLGD
VNGDGIYESL YSFGARSFSV WNGTSGALVY DSKNELETKV NAAGYYDDNR SDDKGVEPEG
ITLGKVGNRN IAFVGMERVD AVAVYDVTKP EAPSFLQLLK SGDAPEGVLF VSAANSPTGK
SLLIVSSEDD GVLKVYSPKT L