| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6624 |
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| Symbol | |
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| ID | 8362812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8306591 |
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| End bp | 8308543 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968756 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003126229 |
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| Protein GI | 256425576 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.11241 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAG GCTATTTCTA TCTACTTTTC TTGCTATTGT TGGTAAAAGG GAATGATATT
CAGGCACAGG ATTCAGTGCT TGTATTCCGC ACACTCGATT CTGCCCGACG GCTTCCCGGT
GATACTGGTA AAGTGAACTG GTTGATTGAT AAAGGCAGAT CGCTGGGACG GTACTTTGAT
AAACGTGGGA CAGAAAACCC CTTTTTTCAG GAGGCAATTA CACTTTCGCT GCGCATGAAA
TATGCGCGTG GCGCTTTCAA TGCATACAAC GAGACCGGCA CCTCCAAAAG AAATAAATCG
GAATATCTCC TCGCCGCCGA TTATCATCAG AAAGCTGTTA AATACGCTGA AGAAGCAAGA
AATGATCTCT GGCTTTGTAT TGCCCTGAAT AACACCGGCG TCGATTACCG CCGTATGGAC
GATCAGCTGG AAAAGGCATT CGACTACCAT TTCAGGGCGC TCCAATTAGC AGAAAAGATC
AATGACGTCC GTAATATCTG TATCGCTATC AATAGCATCG GGAATATTCA TCTCTCCACC
GAAAAATACG CGGAAGCAAT CAACCACTTT GAAAAGGCCC TCGAACTGGA ACGACAAAGC
AAGAATAACC TGGGCGTCGC TATTAACCTC GGCAATATCG GCTACGCCTA CCAGGGTCTG
AAAAAACTGG ATCTGGCCAT CGAATACTAT AAAAAATCTC TGGCGGTCAA TCAACAACTT
GATAATAGTG TCGGATTGGC TATCTGCTAT AACTCCCTCG GATCAGTCTA CCAGGAGAAA
AAAGACTACG CCCGTGCCCT GGAATATCTG AATAAGGCAC TGGAAGTGAA TGGAAATGTA
GACGATAAAG TGCATGTCGC CGAAAGTTAC CTCAACATCG GAAAGCTGTG GAGCCTCCAG
GGTAAACACG AAGAAGCCCG GAAATATTTC ATGCAGTCTA TTAACCTCAG CCTGATCTGG
CGGTTTAAAT ACCTGCTGAT GGAGGCGTAT AAGGCGATGG CCGGCGACTT CAAAGCATCG
GGTGATTTTA AACATTCCAT GGAAGCGTTG GACAAGTCGC TGGTATACAA GGATAGTCTG
ATCAATGAAA AGTCTTCCCT GGCATGGGCA CAGACACAGG CGATCTATGA AGTAGACCGT
AAAGACAACC AGATCAAGTC TTTGGAACAT GACAAACAAA TGAGTGAACT GCGTACCCGG
CGAAATGTAG TCTATACCCT GTCAATGGCA GGCTTTATAC TGATGCTGGG GGTAGGTGGT
TTCTTCTATA TCCGGCACAG AAACCTGGAA ACCAAAAAGC AGACCCTGCA ACTGGAGCTG
CGTTCCCTGC GTGCACAGAT GAATCCTCAC TTCATTTTCA ATTCGCTGAG TTCCATTCAC
CGGTTTATCT GGAGTAATAA CCAGGAAGAA GCGTCGGACT ATCTGACGAA ATTTTCCCGT
TTAATGAGAA TGATACTTGA TAATACGCAG TACACATTCA TATCTTTGAA TAAGGAACTG
GAATCATTAC GCCTGTACCT GGACCTGGAG AAGTTGCGCT GTAATGACGT ATTTGAATAC
CAGATCACTG TAGCAGACGA TATTAACGAA GAAGAAGTAA TGATCCCACC AATGATCATT
CAACCATATG TAGAGAATGC AATCTGGCAT GGTCTGGTAC ATAAATCCGG CCGGGGCATG
TTGGATATAG AAGTCACACT GAAAGGAAAA ACCCTGACCT GTACGGTCAC AGATAATGGT
ATAGGACGGA AAAAGGCAAT AGAAATAAAG GAAAAAAAGG GACAGACCCA TCGCTCAATG
GGCATGAAAG TAACAGAAGG CCGTATAGAC CTCATCAGGA AGATCAACAA TACCAAAGAA
GCAGATGTGA CGATCATAGA CCTGGAAGAT GAGACAGGTA AAGCATTGGG TACAAAGGTG
ACACTCATCT TACCGGTGGA ATTTATATTT TAA
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| Protein sequence | MFKGYFYLLF LLLLVKGNDI QAQDSVLVFR TLDSARRLPG DTGKVNWLID KGRSLGRYFD
KRGTENPFFQ EAITLSLRMK YARGAFNAYN ETGTSKRNKS EYLLAADYHQ KAVKYAEEAR
NDLWLCIALN NTGVDYRRMD DQLEKAFDYH FRALQLAEKI NDVRNICIAI NSIGNIHLST
EKYAEAINHF EKALELERQS KNNLGVAINL GNIGYAYQGL KKLDLAIEYY KKSLAVNQQL
DNSVGLAICY NSLGSVYQEK KDYARALEYL NKALEVNGNV DDKVHVAESY LNIGKLWSLQ
GKHEEARKYF MQSINLSLIW RFKYLLMEAY KAMAGDFKAS GDFKHSMEAL DKSLVYKDSL
INEKSSLAWA QTQAIYEVDR KDNQIKSLEH DKQMSELRTR RNVVYTLSMA GFILMLGVGG
FFYIRHRNLE TKKQTLQLEL RSLRAQMNPH FIFNSLSSIH RFIWSNNQEE ASDYLTKFSR
LMRMILDNTQ YTFISLNKEL ESLRLYLDLE KLRCNDVFEY QITVADDINE EEVMIPPMII
QPYVENAIWH GLVHKSGRGM LDIEVTLKGK TLTCTVTDNG IGRKKAIEIK EKKGQTHRSM
GMKVTEGRID LIRKINNTKE ADVTIIDLED ETGKALGTKV TLILPVEFIF
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