Gene Cpin_6614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6614 
Symbol 
ID8362802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8294324 
End bp8294992 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content47% 
IMG OID644968746 
Productmetal dependent phosphohydrolase 
Protein accessionYP_003126219 
Protein GI256425566 
COG category[R] General function prediction only 
COG ID[COG1418] Predicted HD superfamily hydrolase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.826453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0170307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC ATACAGCTGC AACAGATCTT TTGATTACCA CTACTGAACA ATTCGTAAAA 
AAAGAACTGG CCGATGCCGA AGGCGGCCAT GACTGGTGGC ATATTTACCG GGTCTGGAAA
CTGGCCCGTA AGATTGCAGC CGGGGAGCAG GTGGATATGC TTGTAGTGGA ACTCAGTGCT
TTACTGCACG ATATTGCTGA TTCAAAATTC CATGGCGGAG ATGAAAACAT CGGTCCGCGT
AAAGCCAGGG AATTCCTGGA ATCAATAGGA GCGCCGGAAG CGACCATCCG GCACGTCGTG
GATATTATTG TGAATATCTC ATTCAAAGGC GGACATAATA ACGGTGCATT CTATTCTCCT
GAACTGGGCG TAGTACAGGA TGCCGACCGA CTGGATGCTA TCGGGGCTAT CGGCATCGCC
AGAACCTTTA ATTATGGAGG ATTTAAAAAC CGGGCAATCT ATGATCCGAC TATTCAACCG
GATCTGCATA TGACGAAGGA GCAGTATAAA AACAGTACGG CGCCTACTAT TAATCACTTT
TATGAGAAGC TGTTATTGCT GAAAGACAGA ATGAATACTG CGACAGGTCG CCAGCTGGCA
GCAGAAAGAC ATGTGTTTAT GGAGACGTTC CTGGAGAAGT TTTACCAGGA ATGGGAAGGG
GAAAGCTGA
 
Protein sequence
MSQHTAATDL LITTTEQFVK KELADAEGGH DWWHIYRVWK LARKIAAGEQ VDMLVVELSA 
LLHDIADSKF HGGDENIGPR KAREFLESIG APEATIRHVV DIIVNISFKG GHNNGAFYSP
ELGVVQDADR LDAIGAIGIA RTFNYGGFKN RAIYDPTIQP DLHMTKEQYK NSTAPTINHF
YEKLLLLKDR MNTATGRQLA AERHVFMETF LEKFYQEWEG ES