Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6614 |
Symbol | |
ID | 8362802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8294324 |
End bp | 8294992 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968746 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_003126219 |
Protein GI | 256425566 |
COG category | [R] General function prediction only |
COG ID | [COG1418] Predicted HD superfamily hydrolase |
TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.826453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0170307 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAC ATACAGCTGC AACAGATCTT TTGATTACCA CTACTGAACA ATTCGTAAAA AAAGAACTGG CCGATGCCGA AGGCGGCCAT GACTGGTGGC ATATTTACCG GGTCTGGAAA CTGGCCCGTA AGATTGCAGC CGGGGAGCAG GTGGATATGC TTGTAGTGGA ACTCAGTGCT TTACTGCACG ATATTGCTGA TTCAAAATTC CATGGCGGAG ATGAAAACAT CGGTCCGCGT AAAGCCAGGG AATTCCTGGA ATCAATAGGA GCGCCGGAAG CGACCATCCG GCACGTCGTG GATATTATTG TGAATATCTC ATTCAAAGGC GGACATAATA ACGGTGCATT CTATTCTCCT GAACTGGGCG TAGTACAGGA TGCCGACCGA CTGGATGCTA TCGGGGCTAT CGGCATCGCC AGAACCTTTA ATTATGGAGG ATTTAAAAAC CGGGCAATCT ATGATCCGAC TATTCAACCG GATCTGCATA TGACGAAGGA GCAGTATAAA AACAGTACGG CGCCTACTAT TAATCACTTT TATGAGAAGC TGTTATTGCT GAAAGACAGA ATGAATACTG CGACAGGTCG CCAGCTGGCA GCAGAAAGAC ATGTGTTTAT GGAGACGTTC CTGGAGAAGT TTTACCAGGA ATGGGAAGGG GAAAGCTGA
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Protein sequence | MSQHTAATDL LITTTEQFVK KELADAEGGH DWWHIYRVWK LARKIAAGEQ VDMLVVELSA LLHDIADSKF HGGDENIGPR KAREFLESIG APEATIRHVV DIIVNISFKG GHNNGAFYSP ELGVVQDADR LDAIGAIGIA RTFNYGGFKN RAIYDPTIQP DLHMTKEQYK NSTAPTINHF YEKLLLLKDR MNTATGRQLA AERHVFMETF LEKFYQEWEG ES
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