Gene Cpin_6530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6530 
Symbol 
ID8362714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8192544 
End bp8193209 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content49% 
IMG OID644968658 
ProductCarbonate dehydratase 
Protein accessionYP_003126135 
Protein GI256425482 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.460093 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.148465 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTT ACGATGAAAT CTTCGAGAAT AACCGTCTCT GGGTAGCCAA TAAGACTGCC 
GGAGACAAGG CTTTTTTTGA AAAGCTGGCA AAGGAACAGA ATCCCGATTA TCTGTACATT
GGTTGCAGCG ACAGCCGCGT ACCAACCAAC GAGATCCTGG GCCTGGATGC CGGAGAAGTA
TTCGTACACC GCAACATCGC CAACCTCGTT AACAGCGTGG ACCTGAACGT GATGTCGGTG
ATCAATTACG CTGTACGCCA TCTCAGCGTA AAACACATCG TTGTCTGCGG TCACTATAAC
TGCGGAGGCG TAAAAGCCGC TATGCAGTCC GCCGACCTGG GACTTCTGAA TCCATGGCTC
CGCAACATCC GTGACGTATA CCGCCTGCAC CGTCAGGAGC TGGACGCTAT CGAAGAGCCC
AACGCCCGCT TTAACAGACT CGTAGAACTG AACGTACAGG AGCAATGTAT CAACGTAATT
AAAACAGCCG CTGTACAGCA ATCCTATGTA AATAAAGGCT ACCCTGTCGT ACATGGCTGG
GTATACGACC TTTATACCGG TAACCTGATC GATCTCAAAA TTGACTTTGA AGGTATCCTG
CACAACATCC AGGAAATATA CGACCTCACC GGCCAGGGCC TCATGAAAAA AAAGGATGAT
CAATGA
 
Protein sequence
MTSYDEIFEN NRLWVANKTA GDKAFFEKLA KEQNPDYLYI GCSDSRVPTN EILGLDAGEV 
FVHRNIANLV NSVDLNVMSV INYAVRHLSV KHIVVCGHYN CGGVKAAMQS ADLGLLNPWL
RNIRDVYRLH RQELDAIEEP NARFNRLVEL NVQEQCINVI KTAAVQQSYV NKGYPVVHGW
VYDLYTGNLI DLKIDFEGIL HNIQEIYDLT GQGLMKKKDD Q