Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6516 |
Symbol | |
ID | 8362700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8177463 |
End bp | 8178275 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644968644 |
Product | NIPSNAP family containing protein |
Protein accession | YP_003126121 |
Protein GI | 256425468 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.732065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0663973 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAACAA CACATATATC GTTGAATGCC TTTCATGCCA TGGCTTTCGG TCTGCTGCTT TTATTGCTGC CCTCTTTATC ACAGGCTACG TGTACTGCAC CTCCGAAAAA AGAATATTAC AGCATACTTA TCTATCATCT GAAAGATGCC GCACAGGAAG CACGTATGGA CGCTTATCTG AAGGATGCAC TGCTGCCTGC TTTACACAAG GCAGGAGCCG CACATGTAGG CGTATTTAAG CCTGTAGGAA ACGATACGGC GGCTGATCGC AGGATCTATG TATTTTTCCC GGGCAATTCG ACAGAAACCC TGTTACATAT GCCGGCTACC CTATTACAGA ACAGTGCTTA TCTGGCTGCA GGAAAAGACT TCATTGACGC AGCATGGGAT CAGCCTACAT TCGTACGCCA GGAAACGATT ATCCTGCAGG CATTTCCAGG AATGCCGAAA ATGGCTTTAC CTGCATTGAC GGGCGCCAAA AGTGAACGTA TATACGAATT ACGCAGTTAT GAGAGTCCGT CGGATAAATT ATACCGTAAT AAGGTAGATA TGTTTAACAA AGGTGACGAA GTAGGGATCT TCAAAAGACT GGGTTTTAAT GCGGTATTCT ATGCAGATGT ATTAAGTGGC AGTCGTATGC CTAATCTTAT GTACCTGACT ACTTTTGATA ACAAGGCATC AAGAGATGAA CACTGGAAAG CTTTCAGTAG CGATGCACAA TGGAAAACAT TGCTGGCAAA ACCGGAGTAT GCACATAATG TGAGCAGGTC AGAGATTATT TTTCTGTACC CTGTGGAATA CTCTGATATC TGA
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Protein sequence | MKTTHISLNA FHAMAFGLLL LLLPSLSQAT CTAPPKKEYY SILIYHLKDA AQEARMDAYL KDALLPALHK AGAAHVGVFK PVGNDTAADR RIYVFFPGNS TETLLHMPAT LLQNSAYLAA GKDFIDAAWD QPTFVRQETI ILQAFPGMPK MALPALTGAK SERIYELRSY ESPSDKLYRN KVDMFNKGDE VGIFKRLGFN AVFYADVLSG SRMPNLMYLT TFDNKASRDE HWKAFSSDAQ WKTLLAKPEY AHNVSRSEII FLYPVEYSDI
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